Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 RNU7-59P-201ENST00000459101 61 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 RPL21P6-201ENST00000479171 504 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 RNA5SP464-201ENST00000516251 108 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 FAM60DP-201ENST00000524174 632 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 AC020910.3-201ENST00000603701 874 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 AL356218.2-201ENST00000605264 187 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 ATP1B3P1-201ENST00000605365 821 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 AL021879.1-201ENST00000611756 288 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 AC141273.2-201ENST00000618989 130 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 AL445363.3-201ENST00000623080 671 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 AL136313.1-201ENST00000624804 202 ntBASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UBE2OQ9C0C9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 A2MP1-204ENST00000566278 4130 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AL157777.2-201ENST00000258070 137 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 RNA5SP90-201ENST00000364801 99 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 RNU1-64P-201ENST00000365443 163 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 SNORA70.6-201ENST00000383934 134 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 RNU6-1226P-201ENST00000384317 107 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 Y_RNA.485-201ENST00000384395 102 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AL445189.1-201ENST00000405722 338 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 HMGN1P24-201ENST00000412282 298 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 HMGB3P30-201ENST00000457863 606 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 SNORD121B-201ENST00000458838 81 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 DYNLL1P5-201ENST00000467158 270 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AC022493.2-201ENST00000506122 481 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AC093840.1-201ENST00000511599 336 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 RNA5SP43-201ENST00000516559 110 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 RNU4-77P-201ENST00000516692 156 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AC131281.1-201ENST00000522984 164 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AL122126.1-201ENST00000546905 1318 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 DYNLL1P4-201ENST00000549314 266 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AC090115.3-201ENST00000553218 849 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AC105254.2-201ENST00000603636 436 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 SNORD58B-201ENST00000607313 66 ntBASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
UBE2OQ9C0C9 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 MTND5P7-201ENST00000413558 1798 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 AC108751.5-201ENST00000492880 1336 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 Y_RNA.106-201ENST00000363189 100 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 Y_RNA.350-201ENST00000365409 98 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 Y_RNA.380-201ENST00000365663 111 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 RNU6-1293P-201ENST00000384077 107 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 AC243428.1-201ENST00000421099 264 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 RPL7P37-201ENST00000425095 738 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 HIGD1AP11-201ENST00000438361 280 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 RPL21P2-201ENST00000440049 481 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 DYNLT3P2-201ENST00000442517 295 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 AC112492.4-201ENST00000456549 352 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 AC116533.1-201ENST00000459748 321 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 RPL12P20-201ENST00000475538 479 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 RN7SKP276-201ENST00000516242 268 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms