Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC019227.1-201ENST00000526902 510 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AP003066.2-201ENST00000529375 555 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC123904.3-201ENST00000547218 814 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC044913.1-201ENST00000557200 430 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 MTCO3P24-201ENST00000572729 782 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 MIR4474-201ENST00000579189 78 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC128687.1-201ENST00000605304 619 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC006329.2-201ENST00000611491 394 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AL359198.2-201ENST00000611836 194 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 MIR7843-201ENST00000622274 79 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 CTSLP2-204ENST00000629029 392 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RPAP1Q9BWH6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPAP1Q9BWH6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPAP1Q9BWH6 SNORD82-201ENST00000365530 70 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 SNORD21-201ENST00000383953 95 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 COX6CP18-201ENST00000448769 222 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 MRPL42P4-201ENST00000453267 443 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AC008549.1-201ENST00000512900 643 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 HMGB1P41-201ENST00000520234 440 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AC100870.1-201ENST00000522035 505 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AP003102.1-201ENST00000525638 661 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AC243972.3-201ENST00000539655 198 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 OR7K1P-201ENST00000546439 926 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AC004696.1-201ENST00000614345 607 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AC092650.2-201ENST00000619984 902 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AC009318.4-201ENST00000620496 486 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 AC009487.2-201ENST00000420969 6821 ntBASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPAP1Q9BWH6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 RPLP0P7-201ENST00000416050 667 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 MTCO3P12-201ENST00000416718 547 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 RPS27AP9-201ENST00000477681 438 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC026414.1-201ENST00000504046 698 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC093767.1-201ENST00000504523 156 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC087894.1-201ENST00000538359 518 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 SULT1C2P1-202ENST00000562418 459 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC122134.1-202ENST00000569111 1201 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 VN1R87P-201ENST00000596706 487 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 BDH2P1-201ENST00000602288 736 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC018755.4-201ENST00000619715 454 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC040168.1-201ENST00000623594 991 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC026634.1-201ENST00000634369 198 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AC244517.1-201ENST00000606030 2086 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 AL161431.1-201ENST00000618966 4205 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 MTND4P34-201ENST00000572715 1371 ntBASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.13□□□□□ -1.91
RPAP1Q9BWH6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 RNU6-1066P-201ENST00000363573 105 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 DEFB109C-201ENST00000382575 264 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 DEFB109B-201ENST00000382656 264 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 MIR504-201ENST00000385065 83 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AL603865.2-201ENST00000401679 213 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC009963.1-201ENST00000417265 157 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 ZYG11AP1-201ENST00000430329 837 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC011816.1-201ENST00000441346 546 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC244505.3-201ENST00000454598 187 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 snoU13.4-201ENST00000458916 104 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 snoU13.26-201ENST00000459452 105 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms