Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 COX6B1P1-201ENST00000415962 213 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 HMGB1P12-201ENST00000438594 598 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 RPL34P20-201ENST00000442771 351 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 CCDC34P1-201ENST00000507441 517 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 FAM206BP-201ENST00000510179 541 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 TTC39CP1-201ENST00000512513 755 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AC004024.1-201ENST00000549244 247 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 OR11H5P-201ENST00000554039 926 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AL390726.5-202ENST00000564800 256 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AC007687.1-201ENST00000602704 304 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AC087783.2-201ENST00000605070 562 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AC091953.3-201ENST00000623220 236 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AP003400.5-201ENST00000624827 617 ntBASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAIPQ9BWF2 AL672296.1-201ENST00000427780 2158 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 RN7SKP103-201ENST00000363848 320 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 RNU6-522P-201ENST00000364497 107 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 MIR493-201ENST00000385254 89 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AC063979.1-201ENST00000415539 377 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 OR2AM1P-201ENST00000422137 422 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AC009238.2-201ENST00000431026 355 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 PIGFP3-201ENST00000441918 722 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 H2AFZP6-201ENST00000444403 394 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AL354714.3-201ENST00000447284 493 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 TRBVA-201ENST00000498804 316 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AC140172.1-201ENST00000502928 141 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 RNA5SP43-201ENST00000516559 110 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 RNA5SP471-201ENST00000516971 106 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AL118558.2-201ENST00000556294 238 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 RN7SL652P-201ENST00000577769 300 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 MIR548AC-201ENST00000585049 88 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AL161798.1-201ENST00000604630 131 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AC103710.3-201ENST00000608157 948 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 AC100827.5-201ENST00000615883 426 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 MIR6839-201ENST00000620425 113 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 RMST_7.1-201ENST00000621935 268 ntBASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAIPQ9BWF2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 AC104623.2-202ENST00000623477 4002 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 FAM35BP-202ENST00000497389 3337 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 Y_RNA.61-201ENST00000362835 102 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 RN7SKP113-201ENST00000363891 295 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 RNVU1-6-201ENST00000364688 164 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 Y_RNA.414-201ENST00000384011 101 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 AL583835.1-201ENST00000399570 407 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 BX682237.1-201ENST00000415016 335 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 HSPE1P1-201ENST00000421494 318 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 PRPS1P1-201ENST00000445305 876 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 RNU7-167P-201ENST00000459160 62 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 RPL21P41-201ENST00000459863 264 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 AC011611.1-201ENST00000552179 197 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 MIR4742-201ENST00000581069 85 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 MIR4737-201ENST00000583979 81 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 AC090132.2-201ENST00000615881 347 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms