Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 NXPH1-205ENST00000602349 1953 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 CPHL1P-201ENST00000461341 3407 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 ASNSP3-201ENST00000451989 1306 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 EOGT-210ENST00000615922 1931 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 Y_RNA.22-201ENST00000362492 102 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 Y_RNA.326-201ENST00000365176 113 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 SNORA11-201ENST00000408789 128 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 RNA5SP56-201ENST00000410277 118 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 RNU2-47P-201ENST00000410649 186 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC018644.1-201ENST00000429934 551 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 RPL23AP25-201ENST00000430973 463 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AL121877.1-201ENST00000453704 622 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 GMFBP1-201ENST00000467831 427 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC011276.1-201ENST00000469688 323 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 NIP7P2-201ENST00000485801 544 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 SNORA19.2-201ENST00000516013 114 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 RNA5SP497-201ENST00000516081 97 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 RNU6-1314P-201ENST00000517139 104 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AP003072.1-201ENST00000531740 145 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 OR5BN1P-201ENST00000532955 829 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AL133271.1-201ENST00000538229 291 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 SCOCP1-201ENST00000554676 349 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AL020997.2-201ENST00000602607 184 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 BPIFA4P-203ENST00000603168 689 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AL031176.1-201ENST00000604554 466 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AL121992.2-201ENST00000606262 256 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC020634.1-201ENST00000608701 549 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC103710.2-201ENST00000609912 942 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 AC244100.1-202ENST00000621554 382 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 C2orf27A-204ENST00000623058 969 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NDC1Q9BTX1 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.27□□□□□ -1.73
NDC1Q9BTX1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 MTCO1P9-201ENST00000505577 1534 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC093535.2-201ENST00000624769 2326 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 RN7SKP227-201ENST00000364445 330 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 RNA5SP509-201ENST00000364577 119 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 RNU11-4P-201ENST00000391149 133 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 TXNP7-201ENST00000406296 293 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 RNU6-516P-201ENST00000411381 104 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 TMSB10P2-201ENST00000416049 131 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 OR1AA1P-201ENST00000419597 916 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AL391219.1-201ENST00000422570 483 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 MTCO2P12-201ENST00000427426 682 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 SAR1AP4-201ENST00000429225 591 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 RPL35AP22-201ENST00000436855 335 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 MTND6P18-201ENST00000439477 513 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 RPL23AP43-201ENST00000446445 471 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 MTND1P18-201ENST00000448191 573 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AL591623.2-201ENST00000449978 222 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 MTND3P16-201ENST00000452205 344 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms