Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 PNPLA4P1-201ENST00000458328 305 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AL049873.1-201ENST00000480540 376 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 RN7SL297P-201ENST00000483161 293 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC098799.1-201ENST00000504752 800 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 COX7A2P2-201ENST00000505291 250 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 SNORA48.10-201ENST00000516965 160 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 OR5AK1P-201ENST00000524837 922 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC087373.1-201ENST00000524920 491 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 CR383656.7-201ENST00000548164 174 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 MIR4446-201ENST00000578505 67 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC015688.2-201ENST00000584523 262 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AF131215.7-201ENST00000602443 707 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 DUXAP3-201ENST00000603616 594 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AC140725.3-201ENST00000616193 880 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 MTCO1P4-201ENST00000520516 1409 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 AL512283.1-201ENST00000606756 1384 ntBASIC1.96□□□□□ -2.1
UPK3BQ9BT76 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
UPK3BQ9BT76 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 OR5J1P-201ENST00000313544 939 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 RNU6-609P-201ENST00000365459 107 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 Y_RNA.510-201ENST00000384511 114 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 MIR9-1-201ENST00000385198 89 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 RNU2-25P-201ENST00000411041 191 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AL513477.1-202ENST00000417061 214 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AL356320.2-201ENST00000417263 507 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 BEND7P1-201ENST00000422058 457 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC234781.2-201ENST00000426370 994 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 Z93242.1-201ENST00000427102 353 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC087499.2-201ENST00000432861 149 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC024082.2-201ENST00000434771 238 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 MTND4P15-201ENST00000437913 1033 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 RPS29P6-201ENST00000438196 145 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AL109741.2-201ENST00000455561 343 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC073901.1-201ENST00000462471 408 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AL049714.1-201ENST00000466686 347 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC004924.1-201ENST00000480160 781 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC091826.1-201ENST00000514065 313 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 MIR3921-201ENST00000577308 85 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC008739.2-201ENST00000597006 317 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AP000254.1-201ENST00000609934 520 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AL118556.2-201ENST00000614375 824 ntBASIC1.95□□□□□ -2.1
UPK3BQ9BT76 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
UPK3BQ9BT76 AC009812.4-201ENST00000569134 1805 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 MIR26A1-201ENST00000362205 77 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 RNA5SP393-201ENST00000363423 117 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 RNU6-1180P-201ENST00000364935 107 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 MIR217-201ENST00000384817 110 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 MIR512-1-201ENST00000384913 84 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 MIR1290-201ENST00000408735 78 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 MTCYBP32-201ENST00000427945 1084 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 MTCYBP15-201ENST00000433123 1127 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms