Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 HMGB1P5-201ENST00000255320 642 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 SUGT1P1-201ENST00000379514 476 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 RNU6-354P-201ENST00000383862 107 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 RNU6-610P-201ENST00000384264 107 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 SNORA44-201ENST00000384584 132 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 AL360182.1-201ENST00000397433 468 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 MTCYBP15-201ENST00000433123 1127 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 DSTNP2-201ENST00000504533 515 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 RNU5A-7P-201ENST00000515979 116 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 AP003467.2-201ENST00000520175 319 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 AC087373.1-201ENST00000524920 491 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 ZNF971P-201ENST00000562068 1249 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 BNIP3P24-201ENST00000593398 557 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 AL645944.1-201ENST00000603857 493 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 AC091946.2-201ENST00000606105 291 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 AC093732.2-201ENST00000607950 274 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 AC011330.2-201ENST00000621680 635 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 OR8B1P-202ENST00000641132 1178 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BPIFA3Q9BQP9 ZNF519P1-201ENST00000449011 1626 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AC008669.1-201ENST00000565823 2178 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 MTCO2P17-201ENST00000424336 677 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 MTCYBP32-201ENST00000427945 1084 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AC092393.1-201ENST00000439625 742 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 SUMO2P2-201ENST00000456482 255 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 RPL30P5-201ENST00000494923 336 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 SNORA31.15-201ENST00000516771 132 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 MIR4429-201ENST00000580105 73 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 MIR4325-201ENST00000583049 90 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AL035411.2-201ENST00000604022 421 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AP005137.2-201ENST00000609238 400 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AC002064.3-201ENST00000623448 346 ntBASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.79□□□□□ -1.96
BPIFA3Q9BQP9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 MIR506-201ENST00000384998 124 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 MIR670-201ENST00000390142 98 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 PTGES3P2-201ENST00000407942 482 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 U3.37-201ENST00000408528 213 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 RNU2-47P-201ENST00000410649 186 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 RAP1BP1-201ENST00000412709 553 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AL512637.2-201ENST00000431287 1256 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AC024082.2-201ENST00000434771 238 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AC000041.1-201ENST00000439655 175 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 RPS24P13-201ENST00000442520 397 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AL592447.1-201ENST00000447592 540 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 MIR1254-2-201ENST00000579553 63 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AC098483.2-201ENST00000603158 454 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 DUXAP3-201ENST00000603616 594 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AP000238.1-201ENST00000608759 426 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 TUG1_1.1-201ENST00000610654 145 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 AL161629.2-201ENST00000615347 275 ntBASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
BPIFA3Q9BQP9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 RNU2-43P-201ENST00000410306 190 ntBASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 RNA5SP492-201ENST00000411330 114 ntBASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 AL356320.2-201ENST00000417263 507 ntBASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 AC027644.1-201ENST00000419595 298 ntBASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 VN1R10P-201ENST00000447106 875 ntBASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 AL049714.1-201ENST00000466686 347 ntBASIC2.77□□□□□ -1.97
BPIFA3Q9BQP9 RPL21P131-201ENST00000497298 483 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms