Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.12□□□□□ -1.75
VRK1Q99986 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.12□□□□□ -1.75
VRK1Q99986 AC015917.1-201ENST00000579654 510 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VRK1Q99986 AC024619.4-201ENST00000580924 316 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 AC005730.3-201ENST00000583067 366 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.12□□□□□ -1.75
VRK1Q99986 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VRK1Q99986 CR381572.2-201ENST00000624852 397 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VRK1Q99986 AL136164.3-201ENST00000624429 3978 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
VRK1Q99986 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.11□□□□□ -1.75
VRK1Q99986 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VRK1Q99986 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.11□□□□□ -1.75
VRK1Q99986 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK1Q99986 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VRK1Q99986 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK1Q99986 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK1Q99986 AC010733.2-201ENST00000589496 5702 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VRK1Q99986 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK1Q99986 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK1Q99986 AL590240.1-201ENST00000334118 313 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 RNU6-179P-201ENST00000363350 107 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 Y_RNA.157-201ENST00000363638 102 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 Y_RNA.160-201ENST00000363677 92 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 RNU6-188P-201ENST00000364207 107 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 RNA5SP513-201ENST00000364648 118 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 RNVU1-6-201ENST00000364688 164 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VRK1Q99986 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VRK1Q99986 RPS23P10-201ENST00000416185 486 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 BX510359.2-201ENST00000417920 305 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 PDSS1P1-201ENST00000422953 1114 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VRK1Q99986 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.11□□□□□ -1.75
VRK1Q99986 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VRK1Q99986 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.11□□□□□ -1.75
VRK1Q99986 AC005154.2-201ENST00000438110 379 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 AC016831.4-201ENST00000438302 307 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 AC004938.1-201ENST00000438468 308 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 RPS5P7-201ENST00000456664 608 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 snoU13.24-201ENST00000458998 104 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 RPS20P20-201ENST00000460498 340 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 AC079804.1-201ENST00000461922 436 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.11□□□□□ -1.75
VRK1Q99986 RPL7L1P8-201ENST00000469911 741 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK1Q99986 AC098799.2-201ENST00000509466 868 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 RN7SKP219-201ENST00000516825 296 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 MYL12AP1-201ENST00000518490 515 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.11□□□□□ -1.75
VRK1Q99986 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.11□□□□□ -1.75
VRK1Q99986 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.11□□□□□ -1.75
VRK1Q99986 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.11□□□□□ -1.75
VRK1Q99986 AL138976.2-201ENST00000563989 694 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.11□□□□□ -1.75
VRK1Q99986 AC091135.1-201ENST00000585943 307 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 AC022726.1-201ENST00000587475 207 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 BNIP3P10-201ENST00000605360 577 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 AC012409.3-201ENST00000611343 981 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 AC233309.1-201ENST00000619522 751 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK1Q99986 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK1Q99986 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK1Q99986 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK1Q99986 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VRK1Q99986 RIOK3P1-201ENST00000418778 1528 ntBASIC4.11□□□□□ -1.75
VRK1Q99986 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRK1Q99986 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.1□□□□□ -1.75
VRK1Q99986 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VRK1Q99986 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.1□□□□□ -1.75
VRK1Q99986 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRK1Q99986 AC079741.1-201ENST00000321498 212 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 CBX3P1-201ENST00000325243 554 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 SNORA62.1-201ENST00000364287 154 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRK1Q99986 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VRK1Q99986 U3.30-201ENST00000391308 210 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 AC097374.1-203ENST00000400783 485 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 RNU2-29P-201ENST00000410423 189 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.1□□□□□ -1.75
VRK1Q99986 EIF4EP1-201ENST00000422311 642 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 ZNF863P-201ENST00000426746 417 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.1□□□□□ -1.75
VRK1Q99986 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.1□□□□□ -1.75
VRK1Q99986 AC068287.1-201ENST00000430283 295 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.1□□□□□ -1.75
VRK1Q99986 RPL36AP53-201ENST00000432891 316 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 AL359265.2-201ENST00000434367 631 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 AC024082.2-201ENST00000434771 238 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
VRK1Q99986 RPL26P6-201ENST00000440913 438 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.1□□□□□ -1.75
VRK1Q99986 AC000111.2-201ENST00000448200 210 ntBASIC4.1□□□□□ -1.75
VRK1Q99986 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.1□□□□□ -1.75
VRK1Q99986 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.1□□□□□ -1.75
VRK1Q99986 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms