Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RNA5SP457-201ENST00000363657 124 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 SNORD114-27-201ENST00000363766 70 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 AC005517.2-201ENST00000424673 553 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 AL353093.1-201ENST00000441292 436 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.43□□□□□ -2.18
SPENQ96T58 AC092989.1-201ENST00000481235 277 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.43□□□□□ -2.18
SPENQ96T58 MTATP6P3-201ENST00000581686 676 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.42□□□□□ -2.18
SPENQ96T58 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SPENQ96T58 MIR520E-201ENST00000384867 87 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 RNU2-22P-201ENST00000411266 212 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.42□□□□□ -2.18
SPENQ96T58 RPL23AP20-201ENST00000447965 421 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SPENQ96T58 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.42□□□□□ -2.18
SPENQ96T58 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.42□□□□□ -2.18
SPENQ96T58 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 MIR6788-201ENST00000618842 66 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SPENQ96T58 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SPENQ96T58 RNU6-516P-201ENST00000411381 104 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.42□□□□□ -2.18
SPENQ96T58 NEK4P1-201ENST00000433383 879 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.42□□□□□ -2.18
SPENQ96T58 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.42□□□□□ -2.18
SPENQ96T58 AC069528.1-202ENST00000482888 637 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 AC090071.1-201ENST00000507713 644 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.42□□□□□ -2.18
SPENQ96T58 AC012321.1-201ENST00000561622 1588 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SPENQ96T58 MTCO1P14-201ENST00000441695 1559 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.42□□□□□ -2.18
SPENQ96T58 AP000907.2-201ENST00000530827 353 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 MIR1273G-201ENST00000577677 100 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 AC006023.2-201ENST00000609916 167 ntBASIC1.42□□□□□ -2.18
SPENQ96T58 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SPENQ96T58 RNU6-37P-201ENST00000362692 107 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 RNU6-11P-201ENST00000364234 107 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 RNA5SP139-201ENST00000364340 117 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.41□□□□□ -2.18
SPENQ96T58 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.41□□□□□ -2.18
SPENQ96T58 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.41□□□□□ -2.18
SPENQ96T58 AC008571.1-201ENST00000467232 300 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 AC034222.1-201ENST00000494052 532 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 AC109446.2-201ENST00000567872 497 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.41□□□□□ -2.18
SPENQ96T58 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SPENQ96T58 AC006254.3-201ENST00000603353 884 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 AL157834.3-201ENST00000615543 103 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SPENQ96T58 RNA5SP138-201ENST00000365098 114 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 MTND1P23-201ENST00000416931 372 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.41□□□□□ -2.18
SPENQ96T58 MTCYBP18-201ENST00000501056 747 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 SUMO2P4-201ENST00000504193 276 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.41□□□□□ -2.18
SPENQ96T58 OR4G11P-202ENST00000642116 1414 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 RNU1-22P-201ENST00000363334 158 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SPENQ96T58 RNU6-328P-201ENST00000390887 106 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 AC234781.2-201ENST00000426370 994 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 AC079203.1-201ENST00000487972 404 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.41□□□□□ -2.18
SPENQ96T58 RNU6-826P-201ENST00000516827 104 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 MIR3670-2-201ENST00000582974 65 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 MIR3670-1-201ENST00000584160 65 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 MIR3670-3-201ENST00000584855 65 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 MIR3670-4-201ENST00000612260 65 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 AP003499.2-201ENST00000624100 483 ntBASIC1.41□□□□□ -2.18
SPENQ96T58 FAM35CP-201ENST00000554755 2470 ntBASIC1.4□□□□□ -2.18
SPENQ96T58 MTCO1P6-201ENST00000481192 1384 ntBASIC1.4□□□□□ -2.18
SPENQ96T58 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SPENQ96T58 SNORA51.12-201ENST00000384448 134 ntBASIC1.4□□□□□ -2.19
SPENQ96T58 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.4□□□□□ -2.19
SPENQ96T58 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.4□□□□□ -2.19
SPENQ96T58 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SPENQ96T58 RNA5SP436-201ENST00000516020 115 ntBASIC1.4□□□□□ -2.19
SPENQ96T58 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.4□□□□□ -2.19
SPENQ96T58 NIFKP8-201ENST00000560500 874 ntBASIC1.4□□□□□ -2.19
SPENQ96T58 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SPENQ96T58 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
SPENQ96T58 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
SPENQ96T58 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.4□□□□□ -2.19
SPENQ96T58 AC011979.1-201ENST00000472300 483 ntBASIC1.4□□□□□ -2.19
SPENQ96T58 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.4□□□□□ -2.19
SPENQ96T58 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.4□□□□□ -2.19
SPENQ96T58 AL049838.1-201ENST00000563647 981 ntBASIC1.4□□□□□ -2.19
SPENQ96T58 U73479.1-201ENST00000618062 168 ntBASIC1.4□□□□□ -2.19
SPENQ96T58 RNU4-51P-201ENST00000364206 140 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 BTBD10P2-201ENST00000404779 676 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 RN7SKP101-201ENST00000411376 320 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 AC078918.1-201ENST00000498515 228 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 VN1R74P-201ENST00000613259 503 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.39□□□□□ -2.19
SPENQ96T58 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SPENQ96T58 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms