Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MRPL42P2-201ENST00000403169 426 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MTCO2P27-201ENST00000420740 428 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AL451054.2-201ENST00000420896 202 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MTND2P29-201ENST00000438595 412 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 RPS27AP15-201ENST00000447672 466 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 DEFB109F-201ENST00000491870 277 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC005912.1-201ENST00000495392 255 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AL592156.1-201ENST00000508758 304 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 PARP4P3-201ENST00000510265 317 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC017037.2-201ENST00000513850 890 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-202P-201ENST00000515998 96 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 SUMO2P20-201ENST00000520803 283 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AF279873.1-201ENST00000523393 313 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 PARP1P2-201ENST00000556806 195 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 ATP5J2P6-201ENST00000565203 266 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC136624.4-201ENST00000573044 370 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 LARP7P2-201ENST00000575306 125 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC023575.1-201ENST00000580510 358 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MAGOH2P-202ENST00000584384 429 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 XIAPP1-201ENST00000603162 600 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AP001330.4-201ENST00000604350 154 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC083809.1-201ENST00000615051 472 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC114781.5-201ENST00000615297 108 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AL021997.2-201ENST00000615674 271 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR6758-201ENST00000620653 63 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR6810-201ENST00000622701 70 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC092447.10-201ENST00000620607 1652 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 ASNSP1-204ENST00000641977 1664 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 ASNSP3-201ENST00000451989 1306 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC126755.2-208ENST00000327792 462 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC138969.1-213ENST00000331436 462 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 RN7SKP44-201ENST00000363602 316 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 RNA5SP151-201ENST00000365632 117 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-1297P-201ENST00000384415 104 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 RNY4P36-201ENST00000391116 96 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC009161.1-201ENST00000417306 376 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 BEND7P1-201ENST00000422058 457 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 RPS3AP54-201ENST00000435535 734 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 HMGB3P11-201ENST00000440127 604 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 MTCO2P29-201ENST00000465212 189 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 UQCRHP4-201ENST00000471686 272 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC012158.1-204ENST00000483430 465 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 HMGB1P30-201ENST00000492455 606 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC083829.1-201ENST00000503756 657 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 HMGB3P15-201ENST00000507326 574 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 RN7SKP283-201ENST00000517197 270 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC090572.1-201ENST00000519251 160 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC107934.1-201ENST00000522215 217 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AP003122.3-201ENST00000526316 255 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC063950.1-201ENST00000552036 308 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AL163153.1-201ENST00000554223 283 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 RPL23AP97-201ENST00000568955 471 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms