Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC093853.1-201ENST00000515689 483 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 RNU2-10P-201ENST00000516375 211 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC109635.4-202ENST00000531666 412 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AL117187.1-201ENST00000555482 181 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC009643.2-201ENST00000603543 1448 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AL161756.2-201ENST00000604597 246 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC007938.3-201ENST00000604965 623 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC103710.2-201ENST00000609912 942 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AL390240.1-201ENST00000612950 384 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AL672167.1-204ENST00000641875 3017 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC125257.1-201ENST00000560400 2930 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-249P-201ENST00000363016 102 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 SNORD113-7-201ENST00000363762 77 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC117470.1-201ENST00000381974 330 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-1293P-201ENST00000384077 107 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 MIR19A-201ENST00000384878 82 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 RNA5SP372-201ENST00000390836 115 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 MIR1302-3-201ENST00000408128 138 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 RN7SKP158-201ENST00000410453 326 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 RPS12P24-201ENST00000412619 387 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC140479.3-201ENST00000418944 1126 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC092162.1-201ENST00000432828 434 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 SNRPEP4-201ENST00000435815 279 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AL137792.2-201ENST00000443484 235 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC104058.1-201ENST00000448028 297 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 MTCO3P10-201ENST00000455912 772 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC025164.1-201ENST00000496249 478 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-798P-201ENST00000516912 103 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC010653.1-201ENST00000571108 881 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 RN7SL652P-201ENST00000577769 300 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 MIR5583-1-201ENST00000580941 59 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AL157817.1-201ENST00000614264 790 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-156P-201ENST00000621869 107 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AC091953.5-201ENST00000622919 233 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 AL731566.1-201ENST00000620490 1937 ntBASIC5.39□□□□□ -1.55
SYNGAP1Q96PV0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AL031736.2-201ENST00000426573 787 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 MTCYBP9-201ENST00000431021 303 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 RNU7-66P-201ENST00000459469 62 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 HMGB3P16-201ENST00000508037 287 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 RNA5SP454-201ENST00000517231 127 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AC009902.1-201ENST00000519351 183 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 RPL23AP53-201ENST00000521854 457 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AC069061.3-201ENST00000582254 823 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 MIR3936-201ENST00000584304 110 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 RN7SL435P-201ENST00000584418 282 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms