Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 RPL17P50-201ENST00000396131 546 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 RPS4XP3-201ENST00000398541 413 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC019178.2-201ENST00000423595 505 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC007742.1-201ENST00000425789 329 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 ELOCP26-201ENST00000436067 329 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 RPL23AP74-201ENST00000437246 471 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 MUPP-201ENST00000438111 566 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AL831737.1-201ENST00000441288 271 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AL135938.1-201ENST00000443141 297 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 RPL39P40-201ENST00000445481 146 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 MTCYBP11-201ENST00000447254 1109 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 RPL21P41-201ENST00000459863 264 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 RPS29P12-201ENST00000460178 152 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC008427.1-201ENST00000503102 655 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC097462.2-201ENST00000504623 481 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 GMPSP1-201ENST00000514075 579 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 SCARNA13-201ENST00000516672 275 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC024153.1-201ENST00000603103 365 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC005332.6-201ENST00000613178 446 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC084824.4-201ENST00000620106 731 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC120349.2-201ENST00000625002 298 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 AC093831.2-201ENST00000624393 3427 ntBASIC2.95□□□□□ -1.94
RPRD1AQ96P16 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.95□□□□□ -1.94
RPRD1AQ96P16 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC009812.4-201ENST00000569134 1805 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 MTND4P13-201ENST00000402078 1023 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 RNU2-42P-201ENST00000410697 113 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 RAP1BP1-201ENST00000412709 553 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 PTP4A1P7-201ENST00000423476 514 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC092427.1-201ENST00000439177 601 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC025750.2-201ENST00000442609 450 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 SUMO2P2-201ENST00000456482 255 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 PNPLA4P1-201ENST00000458328 305 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC023424.2-201ENST00000493479 777 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC104072.1-201ENST00000568817 668 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 OR4K8P-201ENST00000578842 1048 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC091057.2-201ENST00000602594 792 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 RPL23AP88-201ENST00000605759 454 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC093673.2-201ENST00000609674 331 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 MIR1322-201ENST00000638013 71 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC138915.1-201ENST00000565427 1685 ntBASIC2.94□□□□□ -1.94
RPRD1AQ96P16 AC107982.1-201ENST00000507171 1300 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 SNORA18.3-201ENST00000384122 132 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 MIR512-1-201ENST00000384913 84 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 Y_RNA.578-201ENST00000390903 88 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 U3.26-201ENST00000391236 204 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 RNA5SP492-201ENST00000411330 114 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 AL161449.1-201ENST00000414531 1199 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 AL645937.1-202ENST00000421799 937 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 HMGN2P30-201ENST00000423237 256 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 AL590233.1-201ENST00000430017 456 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 AL353691.1-201ENST00000451332 387 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 OFD1P3Y-201ENST00000453312 783 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 SETP11-201ENST00000473027 690 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 TMEM251P1-201ENST00000503717 318 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 HIGD1AP13-201ENST00000509878 289 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 AC087808.1-201ENST00000520501 361 ntBASIC2.93□□□□□ -1.94
RPRD1AQ96P16 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.93□□□□□ -1.94
RPRD1AQ96P16 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms