Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.74□□□□□ -1.49
CALR3Q96L12 SNRPGP15-201ENST00000600149 222 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.74□□□□□ -1.49
CALR3Q96L12 AC105254.2-201ENST00000603636 436 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 ELOCP5-201ENST00000604924 333 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 AC005344.1-201ENST00000613391 459 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CALR3Q96L12 AC005183.1-201ENST00000603687 1979 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CALR3Q96L12 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CALR3Q96L12 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.74□□□□□ -1.49
CALR3Q96L12 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.74□□□□□ -1.49
CALR3Q96L12 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.73□□□□□ -1.49
CALR3Q96L12 Y_RNA.364-201ENST00000365532 101 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 RNU6-196P-201ENST00000384315 107 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 MIR301A-201ENST00000385261 86 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 MTCYBP10-201ENST00000424905 650 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 AL121776.1-201ENST00000429337 372 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 HMGB1P9-201ENST00000429856 646 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 AC097713.2-201ENST00000430199 356 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 RPL7L1P9-201ENST00000431298 745 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 IPO7P1-201ENST00000442031 636 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.73□□□□□ -1.49
CALR3Q96L12 RNA5SP271-201ENST00000516700 88 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 RNA5SP471-201ENST00000516971 106 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.73□□□□□ -1.49
CALR3Q96L12 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.73□□□□□ -1.49
CALR3Q96L12 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.73□□□□□ -1.49
CALR3Q96L12 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.73□□□□□ -1.49
CALR3Q96L12 AC010653.1-201ENST00000571108 881 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.73□□□□□ -1.49
CALR3Q96L12 AL121655.1-201ENST00000605811 308 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.73□□□□□ -1.49
CALR3Q96L12 AC010205.1-201ENST00000616668 449 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 AC007485.1-201ENST00000616755 206 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 MIR6839-201ENST00000620425 113 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 AL360181.4-201ENST00000621752 134 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.73□□□□□ -1.49
CALR3Q96L12 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 AL732372.2-225ENST00000642124 456 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 ZNF807-201ENST00000328088 1707 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CALR3Q96L12 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CALR3Q96L12 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 LINC01109-201ENST00000603837 3081 ntBASIC5.73□□□□□ -1.49
CALR3Q96L12 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CALR3Q96L12 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.72□□□□□ -1.49
CALR3Q96L12 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CALR3Q96L12 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CALR3Q96L12 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CALR3Q96L12 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CALR3Q96L12 Y_RNA.2-201ENST00000362330 96 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 RNU6-1167P-201ENST00000363227 94 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 RN7SKP171-201ENST00000364417 303 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 RNU6-512P-201ENST00000364438 103 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 RNA5SP455-201ENST00000365190 119 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 DUTP5-201ENST00000406790 469 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 RNU4-6P-201ENST00000410804 122 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 AC007738.1-201ENST00000413892 348 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 AL353621.1-201ENST00000418219 243 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 RPL24P2-201ENST00000421023 475 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 BX323845.3-201ENST00000428215 527 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.72□□□□□ -1.49
CALR3Q96L12 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.72□□□□□ -1.49
CALR3Q96L12 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.72□□□□□ -1.49
CALR3Q96L12 SNRPEP4-201ENST00000435815 279 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.72□□□□□ -1.49
CALR3Q96L12 AP006222.1-205ENST00000450734 457 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CALR3Q96L12 HMGB1P30-201ENST00000492455 606 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.72□□□□□ -1.49
CALR3Q96L12 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.72□□□□□ -1.49
CALR3Q96L12 RNU6-1315P-201ENST00000517187 99 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 IGKV2D-23-201ENST00000518179 286 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 AP003122.3-201ENST00000526316 255 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.72□□□□□ -1.49
CALR3Q96L12 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.72□□□□□ -1.49
CALR3Q96L12 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.72□□□□□ -1.49
CALR3Q96L12 MIR1273C-201ENST00000578669 77 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 AC005899.2-201ENST00000584353 90 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.72□□□□□ -1.49
CALR3Q96L12 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CALR3Q96L12 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.72□□□□□ -1.49
CALR3Q96L12 AC012616.1-201ENST00000600294 197 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 AC098826.3-201ENST00000603823 466 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 AC006157.1-201ENST00000611750 366 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CALR3Q96L12 SMG1P4-204ENST00000523028 4131 ntBASIC5.72□□□□□ -1.49
CALR3Q96L12 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CALR3Q96L12 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CALR3Q96L12 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms