Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC092954.1-201ENST00000609121 445 ntBASIC2.72□□□□□ -1.97
ECHDC3Q96DC8 AL138880.2-201ENST00000616214 239 ntBASIC2.72□□□□□ -1.97
ECHDC3Q96DC8 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.72□□□□□ -1.97
ECHDC3Q96DC8 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.72□□□□□ -1.97
ECHDC3Q96DC8 RNU5B-4P-201ENST00000363508 111 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 RNU6-173P-201ENST00000364215 104 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 RNA5SP139-201ENST00000364340 117 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 MIR506-201ENST00000384998 124 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 RNU2-28P-201ENST00000410457 189 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 RNU2-15P-201ENST00000410692 191 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 RNA5SP184-201ENST00000411071 108 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC019097.1-201ENST00000424783 735 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AL390023.1-201ENST00000428836 262 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC108938.1-201ENST00000451204 136 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 SNORD109B-201ENST00000458961 67 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 SNORD109A-201ENST00000459128 67 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC009901.1-201ENST00000506703 541 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AL355836.1-201ENST00000555951 870 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 VN1R87P-201ENST00000596706 487 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC012443.1-201ENST00000605605 231 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AL592148.2-201ENST00000612210 372 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 AC006927.2-201ENST00000639256 389 ntBASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.71□□□□□ -1.98
ECHDC3Q96DC8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 RNU6-707P-201ENST00000364647 95 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 SNORD21-201ENST00000383953 95 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 RNU6-878P-201ENST00000384578 110 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 RNU6-1300P-201ENST00000391046 108 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AL035405.1-201ENST00000400795 710 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AL356057.3-201ENST00000402607 340 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 PSMA6P3-201ENST00000428242 164 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 ARF4P4-201ENST00000439608 520 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 RPL23AP20-201ENST00000447965 421 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 RFC5P1-201ENST00000454419 874 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AC006445.2-201ENST00000510061 472 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 RAC1P5-201ENST00000512182 576 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 SNORA70.16-201ENST00000516390 95 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AP003066.2-201ENST00000529375 555 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AADACP1-206ENST00000561502 1193 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 OR2AS2P-201ENST00000606902 342 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AC069234.5-201ENST00000611056 416 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 AC002064.3-201ENST00000623448 346 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 CR381653.2-201ENST00000624041 768 ntBASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
ECHDC3Q96DC8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 RNU6-859P-201ENST00000362728 107 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 Y_RNA.111-201ENST00000363248 100 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 RPS7P9-201ENST00000414704 586 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AC019070.1-201ENST00000415008 1024 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AL137014.1-201ENST00000420490 1226 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AC092393.1-201ENST00000439625 742 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AP000936.2-201ENST00000447151 681 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AL589880.1-201ENST00000448271 287 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AL109933.2-201ENST00000452651 260 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AIG1P1-201ENST00000503376 148 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AC010625.1-201ENST00000511296 403 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 RNA5SP282-201ENST00000516355 108 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms