Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 SNORD88.1-201ENST00000408684 91 ntBASIC1.65□□□□□ -2.15
TTC28Q96AY4 RPS15AP6-201ENST00000420703 385 ntBASIC1.65□□□□□ -2.15
TTC28Q96AY4 VN1R108P-201ENST00000431580 830 ntBASIC1.65□□□□□ -2.15
TTC28Q96AY4 HMGB1P26-201ENST00000452520 628 ntBASIC1.65□□□□□ -2.15
TTC28Q96AY4 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.65□□□□□ -2.15
TTC28Q96AY4 MIR6788-201ENST00000618842 66 ntBASIC1.65□□□□□ -2.15
TTC28Q96AY4 AL136164.4-201ENST00000625013 2135 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 SNRPFP2-201ENST00000440710 251 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 AC245517.2-201ENST00000442890 346 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 AL583843.1-201ENST00000456070 346 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 AC092451.2-201ENST00000538746 658 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 AC103810.1-201ENST00000579873 453 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 AC090970.3-201ENST00000612566 866 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 AC007342.9-201ENST00000623877 1385 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 RNU6-984P-201ENST00000363236 109 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 SNORD6-201ENST00000365444 73 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 RNU1-139P-201ENST00000391307 165 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 FTH1P12-201ENST00000432137 551 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 AL645568.3-201ENST00000433683 316 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 RNU7-170P-201ENST00000459303 61 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 RNU7-157P-201ENST00000459600 66 ntBASIC1.64□□□□□ -2.15
TTC28Q96AY4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TTC28Q96AY4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.64□□□□□ -2.15
TTC28Q96AY4 CR382285.2-201ENST00000624662 1495 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 AL512430.2-201ENST00000406786 339 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 EIF1AXP1-201ENST00000419267 435 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 HIGD1AP11-201ENST00000438361 280 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TTC28Q96AY4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.63□□□□□ -2.15
TTC28Q96AY4 AL355596.1-201ENST00000565399 3996 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.63□□□□□ -2.15
TTC28Q96AY4 IPMKP1-201ENST00000425988 855 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 TRIAP1P1-201ENST00000427062 225 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 AC109486.1-201ENST00000486833 374 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.63□□□□□ -2.15
TTC28Q96AY4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.63□□□□□ -2.15
TTC28Q96AY4 NF1P5-201ENST00000588287 448 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.63□□□□□ -2.15
TTC28Q96AY4 AC087468.1-201ENST00000604365 630 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 AC022960.2-201ENST00000616300 666 ntBASIC1.63□□□□□ -2.15
TTC28Q96AY4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.63□□□□□ -2.15
TTC28Q96AY4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
TTC28Q96AY4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TTC28Q96AY4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.63□□□□□ -2.15
TTC28Q96AY4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.62□□□□□ -2.15
TTC28Q96AY4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.62□□□□□ -2.15
TTC28Q96AY4 Y_RNA.274-201ENST00000364714 101 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 Y_RNA.294-201ENST00000364916 102 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 ARL5AP3-201ENST00000439327 386 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 AC092185.1-201ENST00000491371 97 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 AC036111.3-201ENST00000526389 112 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 AC087241.2-201ENST00000535801 324 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 CD24P2-201ENST00000565486 219 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.62□□□□□ -2.15
TTC28Q96AY4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TTC28Q96AY4 AL139286.1-201ENST00000604465 483 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 AC097468.3-201ENST00000607956 456 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 AC024560.3-201ENST00000608482 349 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 AL592494.3-201ENST00000609485 464 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.62□□□□□ -2.15
TTC28Q96AY4 RNU6-1263P-201ENST00000384601 106 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 AC106901.1-201ENST00000425086 698 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 IFNWP4-201ENST00000453148 294 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.62□□□□□ -2.15
TTC28Q96AY4 AC069528.1-202ENST00000482888 637 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.62□□□□□ -2.15
TTC28Q96AY4 VIS1.1-201ENST00000610517 203 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 AC012150.2-201ENST00000621300 544 ntBASIC1.62□□□□□ -2.15
TTC28Q96AY4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TTC28Q96AY4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
TTC28Q96AY4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TTC28Q96AY4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TTC28Q96AY4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 RPS3AP44-201ENST00000425466 790 ntBASIC1.61□□□□□ -2.15
TTC28Q96AY4 AL365400.1-201ENST00000431854 640 ntBASIC1.61□□□□□ -2.15
TTC28Q96AY4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 USP9YP10-201ENST00000454868 628 ntBASIC1.61□□□□□ -2.15
TTC28Q96AY4 SNRPFP3-201ENST00000457792 225 ntBASIC1.61□□□□□ -2.15
TTC28Q96AY4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.61□□□□□ -2.15
TTC28Q96AY4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms