Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 HMGB1P14-201ENST00000557424 591 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC092574.1-201ENST00000609771 420 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC004696.1-201ENST00000614345 607 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AL590099.1-201ENST00000615276 138 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC123767.1-202ENST00000620407 817 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC104985.3-201ENST00000623479 597 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC068880.5-201ENST00000624331 290 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 OR1S1-201ENST00000624470 978 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC110079.1-202ENST00000635213 138 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC47Q96A33 AC005539.1-201ENST00000443768 1479 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 AC008669.1-201ENST00000565823 2178 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 MIR22-201ENST00000362190 85 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 RNA5SP120-201ENST00000410900 112 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 AL513477.1-202ENST00000417061 214 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 AL356320.2-201ENST00000417263 507 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 LSM1P1-201ENST00000438629 273 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 GMPSP1-201ENST00000514075 579 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 AC128657.1-201ENST00000549459 145 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 VN1R83P-201ENST00000595685 445 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 AL022067.1-201ENST00000602426 454 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 AL606834.3-201ENST00000602615 496 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 MIR6798-201ENST00000612887 67 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC47Q96A33 AC026241.1-201ENST00000517873 2142 ntBASIC3.37□□□□□ -1.87
CCDC47Q96A33 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC47Q96A33 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC47Q96A33 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC47Q96A33 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC47Q96A33 RNU6-76P-201ENST00000384060 104 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 HMGB1P17-201ENST00000403495 628 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC47Q96A33 AL449283.1-202ENST00000418249 604 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 YME1L1P1-201ENST00000429435 297 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 YWHAZP7-201ENST00000436906 631 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC47Q96A33 MTND4P6-201ENST00000438297 472 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 RN7SL807P-201ENST00000470923 297 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 RPL30P5-201ENST00000494923 336 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 AC113347.3-201ENST00000509113 148 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 XKRY-201ENST00000510392 1100 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 AC090695.1-201ENST00000561269 1222 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC47Q96A33 MTND3P13-201ENST00000574391 343 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 AC008739.2-201ENST00000597006 317 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 AP001429.1-201ENST00000602568 530 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 AL161629.2-201ENST00000615347 275 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 AC010680.1-201ENST00000590024 3590 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC47Q96A33 AP000526.1-201ENST00000603308 1388 ntBASIC3.36□□□□□ -1.87
CCDC47Q96A33 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC47Q96A33 SNORA63.1-201ENST00000362493 131 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC47Q96A33 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 RPL18AP17-201ENST00000455326 198 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 RPS29P2-201ENST00000479278 136 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC47Q96A33 SNORA19.3-201ENST00000516165 130 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 SNORA31.21-201ENST00000517180 77 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 AC118942.1-201ENST00000529674 1035 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 AC107016.2-201ENST00000547968 190 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 CCNG2P1-201ENST00000549521 1000 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 AL132657.2-201ENST00000564417 358 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 AC008443.7-201ENST00000622195 246 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC47Q96A33 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
CCDC47Q96A33 AC005832.2-201ENST00000538921 1430 ntBASIC3.35□□□□□ -1.87
CCDC47Q96A33 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms