Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 JKAMPP1-201ENST00000413804 919 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 MTND3P17-201ENST00000416968 344 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC133104.1-201ENST00000429100 218 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 OR4C10P-201ENST00000434991 931 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 SNRPGP5-201ENST00000456003 220 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC135721.1-201ENST00000497954 479 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 AC139783.2-201ENST00000504847 1145 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.42□□□□□ -1.7
HPS3Q969F9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.42□□□□□ -1.7
HPS3Q969F9 Vault.1-201ENST00000516474 102 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 RN7SKP244-201ENST00000516513 307 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC011979.2-201ENST00000527568 352 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 DEFB108D-201ENST00000527787 222 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS3Q969F9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS3Q969F9 GNRHR2P1-201ENST00000555315 631 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 AL133153.1-201ENST00000557756 303 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HPS3Q969F9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AP000860.1-201ENST00000605250 559 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 U4.5-201ENST00000617137 123 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 ZYXP1-201ENST00000617638 118 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 AC103858.2-201ENST00000621471 543 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AC034229.5-201ENST00000624258 185 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS3Q969F9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HPS3Q969F9 DDX10P1-201ENST00000448545 1933 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.42□□□□□ -1.7
HPS3Q969F9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.42□□□□□ -1.7
HPS3Q969F9 AL645937.1-201ENST00000641739 1652 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS3Q969F9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HPS3Q969F9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
HPS3Q969F9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS3Q969F9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS3Q969F9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS3Q969F9 RNA5SP515-201ENST00000364570 118 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 SNORA48.7-201ENST00000391302 135 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 RPL7P60-201ENST00000397636 735 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS3Q969F9 AL022722.2-201ENST00000402519 180 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 AL445189.1-201ENST00000405722 338 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 RN7SKP177-201ENST00000410567 355 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS3Q969F9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.41□□□□□ -1.7
HPS3Q969F9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS3Q969F9 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.41□□□□□ -1.7
HPS3Q969F9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS3Q969F9 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 MTATP6P13-201ENST00000438531 667 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.41□□□□□ -1.7
HPS3Q969F9 RPL21P89-201ENST00000444021 467 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS3Q969F9 AC079448.1-201ENST00000449377 373 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS3Q969F9 PSPHP1-201ENST00000450062 261 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS3Q969F9 FABP3P2-201ENST00000453169 399 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 C1DP4-201ENST00000455429 424 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 AC093899.1-201ENST00000457984 376 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 AP000926.1-201ENST00000479573 241 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 AC020893.1-201ENST00000502452 580 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 HMGB1P29-201ENST00000505659 499 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS3Q969F9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS3Q969F9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS3Q969F9 RNU6-314P-201ENST00000516574 104 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 RNA5SP337-201ENST00000517007 109 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS3Q969F9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS3Q969F9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS3Q969F9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS3Q969F9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HPS3Q969F9 AC027807.1-201ENST00000559921 996 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 AC006338.1-201ENST00000618453 749 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 AC233309.1-201ENST00000619522 751 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms