Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC111000.3-201ENST00000508057 576 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.76□□□□□ -1.65
ERCC4Q92889 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC4Q92889 AC021146.1-201ENST00000511202 716 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 RN7SKP92-201ENST00000517266 244 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC4Q92889 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC4Q92889 OR4T1P-201ENST00000554933 911 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC4Q92889 AC034105.3-201ENST00000565294 442 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 HMGB1P6-201ENST00000569046 646 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC4Q92889 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC4Q92889 AP003117.2-201ENST00000606010 545 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC4Q92889 AP005019.3-201ENST00000620418 560 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 AC010338.1-201ENST00000621823 717 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 MIR7641-1-201ENST00000627518 61 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC4Q92889 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC4Q92889 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ERCC4Q92889 AC090229.1-201ENST00000590983 1609 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC4Q92889 ZNF680P1-201ENST00000436625 1469 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC4Q92889 AL138713.1-201ENST00000624026 2130 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC4Q92889 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.75□□□□□ -1.65
ERCC4Q92889 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC4Q92889 OR5P1P-201ENST00000299512 925 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 XIAPP3-201ENST00000312918 795 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 Y_RNA.381-201ENST00000365666 102 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ERCC4Q92889 SNORA69-201ENST00000383895 132 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 RNU6-74P-201ENST00000384235 107 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ERCC4Q92889 RNA5SP36-201ENST00000410197 133 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 RNU2-15P-201ENST00000410692 191 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 DNAJC19P7-201ENST00000428811 344 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.75□□□□□ -1.65
ERCC4Q92889 AC068287.1-201ENST00000430283 295 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 TIMM9P1-201ENST00000436122 256 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 UBE2V1P13-201ENST00000436983 439 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.75□□□□□ -1.65
ERCC4Q92889 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.75□□□□□ -1.65
ERCC4Q92889 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.75□□□□□ -1.65
ERCC4Q92889 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.75□□□□□ -1.65
ERCC4Q92889 NANOGP10-201ENST00000453325 895 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 RN7SL585P-201ENST00000470538 280 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 RN7SL459P-201ENST00000481078 302 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.75□□□□□ -1.65
ERCC4Q92889 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.75□□□□□ -1.65
ERCC4Q92889 AC017037.1-201ENST00000508460 471 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 MTCO3P44-201ENST00000510977 541 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.75□□□□□ -1.65
ERCC4Q92889 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.75□□□□□ -1.65
ERCC4Q92889 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.75□□□□□ -1.65
ERCC4Q92889 HIGD1AP5-201ENST00000529959 259 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 OR4P1P-201ENST00000530808 1136 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.75□□□□□ -1.65
ERCC4Q92889 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.75□□□□□ -1.65
ERCC4Q92889 GLYCAM1-201ENST00000546596 285 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.75□□□□□ -1.65
ERCC4Q92889 KC877982.1-201ENST00000602313 470 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 AC008745.1-201ENST00000604064 271 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 AC010680.3-201ENST00000604215 520 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 AC087045.1-201ENST00000605856 382 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 AC024940.5-201ENST00000622889 474 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
ERCC4Q92889 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC4Q92889 EIF2AP4-201ENST00000424793 1781 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC4Q92889 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC4Q92889 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC4Q92889 ZNF33CP-201ENST00000432492 2030 ntBASIC4.75□□□□□ -1.65
ERCC4Q92889 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.75□□□□□ -1.65
ERCC4Q92889 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC4Q92889 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC4Q92889 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC4Q92889 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC4Q92889 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC4Q92889 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC4Q92889 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ERCC4Q92889 Y_RNA.72-201ENST00000362894 103 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 Y_RNA.509-201ENST00000384506 99 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 MIR19A-201ENST00000384878 82 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 MT-TD-201ENST00000387419 68 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC4Q92889 RN7SKP263-201ENST00000411194 309 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 OR9R1P-201ENST00000412200 877 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 RPS15AP12-201ENST00000419498 388 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AL513185.2-201ENST00000425543 193 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AL157831.1-201ENST00000426134 473 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AC137499.1-201ENST00000427602 88 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC4Q92889 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC4Q92889 RPL23AP30-201ENST00000432419 501 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms