Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 AC090616.5-202ENST00000582111 297 ntBASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 AC060780.3-201ENST00000589464 80 ntBASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 BNIP3P33-201ENST00000598912 569 ntBASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 AL162413.1-201ENST00000603198 110 ntBASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 AC007038.2-201ENST00000608095 740 ntBASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 MIR6748-201ENST00000610433 71 ntBASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 uc_338.13-201ENST00000618243 179 ntBASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 AC007546.1-201ENST00000619452 559 ntBASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 FER-210ENST00000628534 558 ntTSL 5 BASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCHCR1Q8TD31 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCHCR1Q8TD31 CASC19-280ENST00000642102 1351 ntBASIC4.4□□□□□ -1.7
CCHCR1Q8TD31 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCHCR1Q8TD31 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 RNY3P13-201ENST00000365542 102 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 RNU6-877P-201ENST00000383868 107 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 RNU2-47P-201ENST00000410649 186 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 RNU2-62P-201ENST00000410868 191 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AL807761.1-201ENST00000417622 171 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 RPL7P54-201ENST00000438336 674 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 RPS17P13-201ENST00000448974 407 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 snoU13.3-201ENST00000459441 104 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 Y_RNA.702-201ENST00000516843 96 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 MIR4277-201ENST00000578298 84 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AC105224.1-201ENST00000587055 421 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AC004908.2-201ENST00000609090 574 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AC103710.2-201ENST00000609912 942 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AL161637.1-201ENST00000622380 412 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AP003122.6-201ENST00000623831 495 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 NMD3P1-201ENST00000439704 1488 ntBASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.4□□□□□ -1.71
CCHCR1Q8TD31 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 MARK2P15-201ENST00000432204 2186 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 MAPK10-373ENST00000641983 6772 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC007685.1-201ENST00000329806 452 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 Y_RNA.38-201ENST00000362617 102 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 MIR153-1-201ENST00000384914 90 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 SNORA11F-201ENST00000408237 128 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 HMGN1P24-201ENST00000412282 298 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC009237.5-201ENST00000414271 501 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 SNRPEP10-201ENST00000420249 274 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 RPS15AP9-201ENST00000439856 381 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 CALM1P1-201ENST00000442082 433 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC079781.2-201ENST00000446424 169 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 RPL23AP81-201ENST00000455252 467 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC022364.2-201ENST00000457963 554 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 RN7SL98P-201ENST00000462271 300 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 RPL21P103-201ENST00000479921 488 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 SCARNA24.1-201ENST00000516465 137 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC063950.1-201ENST00000552036 308 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC115621.1-201ENST00000604653 858 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC113403.1-201ENST00000604910 193 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AL049634.3-201ENST00000604968 457 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC010680.4-201ENST00000605334 543 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AL713922.2-201ENST00000619384 716 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AP005264.7-201ENST00000625003 745 ntBASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms