Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNU1-39P-201ENST00000383897 165 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC110754.1-201ENST00000399740 601 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC89Q8N998 AL359704.1-201ENST00000411586 781 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 RPS15AP6-201ENST00000420703 385 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC013410.2-201ENST00000422627 201 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 RPS4XP2-201ENST00000458402 793 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 RPL23AP67-201ENST00000465341 474 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 LARP1BP2-201ENST00000486594 519 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 RPS15AP36-201ENST00000492022 382 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC114967.1-201ENST00000504890 259 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 HMGN1P11-201ENST00000508668 303 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 AL845331.3-202ENST00000562856 261 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AF038458.1-201ENST00000588406 262 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 AL161729.4-201ENST00000604650 476 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC107294.3-201ENST00000609211 526 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AL136295.6-201ENST00000610486 658 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 SDR42E1P2-201ENST00000614861 481 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 AL357559.1-201ENST00000622228 274 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 AL356596.1-201ENST00000624230 379 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC89Q8N998 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC89Q8N998 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC89Q8N998 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC89Q8N998 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC008669.1-201ENST00000565823 2178 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC89Q8N998 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC89Q8N998 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 AL513331.1-201ENST00000411908 397 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 HMGN2P30-201ENST00000423237 256 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 MTND1P32-201ENST00000433043 938 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 BX679664.1-201ENST00000434429 253 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC89Q8N998 RSU1P2-202ENST00000437884 485 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AL714022.1-201ENST00000439897 151 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 BNIP3P2-201ENST00000441221 577 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 PIGFP3-201ENST00000441918 722 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 H2AFZP6-201ENST00000444403 394 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 TPT1P14-201ENST00000448018 505 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 RN7SL385P-201ENST00000468873 276 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 RN7SL601P-201ENST00000471221 293 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 RPS20P22-201ENST00000473700 357 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC116337.2-201ENST00000477662 156 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC104685.1-201ENST00000502445 371 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 POU5F1P7-201ENST00000508759 541 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 RN7SKP282-201ENST00000516824 299 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 MTND2P32-201ENST00000521584 1038 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 ATP5F1P5-201ENST00000526403 760 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC89Q8N998 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC023538.1-201ENST00000534576 736 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC061975.8-201ENST00000587058 721 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 UBE2L4-201ENST00000587688 464 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 TPMTP1-201ENST00000592307 737 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC097468.3-201ENST00000607956 456 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC009464.1-201ENST00000615731 469 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AL158801.5-201ENST00000623123 465 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AP000676.3-201ENST00000623299 569 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 AC068880.5-201ENST00000624331 290 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.62□□□□□ -1.83
CCDC89Q8N998 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC89Q8N998 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC89Q8N998 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC89Q8N998 AL513302.2-201ENST00000562313 1842 ntBASIC3.61□□□□□ -1.83
CCDC89Q8N998 RNU1-105P-201ENST00000363470 161 ntBASIC3.61□□□□□ -1.83
CCDC89Q8N998 ANAPC10P1-201ENST00000395991 556 ntBASIC3.61□□□□□ -1.83
CCDC89Q8N998 AL109755.1-201ENST00000401791 649 ntBASIC3.61□□□□□ -1.83
CCDC89Q8N998 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC89Q8N998 RNA5SP31-201ENST00000411144 127 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms