Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNA5SP164-201ENST00000516533 110 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 RNU2-46P-201ENST00000517038 113 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC090502.2-201ENST00000549267 280 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 RPL21P5-201ENST00000554662 472 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AL157687.1-201ENST00000554853 619 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC090877.1-201ENST00000561418 344 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 SNORD39.3-201ENST00000584451 71 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC108479.2-201ENST00000617314 601 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC009159.1-201ENST00000618386 642 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 RNU6-156P-201ENST00000621869 107 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC009268.2-201ENST00000621925 457 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 MIR1321-201ENST00000637766 79 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNE4Q8N205 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNE4Q8N205 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNE4Q8N205 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC006378.2-201ENST00000623178 2476 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC068254.2-201ENST00000623938 3577 ntBASIC4.65□□□□□ -1.66
SYNE4Q8N205 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SYNE4Q8N205 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SYNE4Q8N205 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.65□□□□□ -1.66
SYNE4Q8N205 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SYNE4Q8N205 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.65□□□□□ -1.66
SYNE4Q8N205 OR5J1P-201ENST00000313544 939 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 Y_RNA.279-201ENST00000364763 95 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 Y_RNA.356-201ENST00000365475 113 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 Y_RNA.394-201ENST00000383942 103 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AL356057.2-201ENST00000403318 432 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 Y_RNA.608-201ENST00000410647 95 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 AL031736.2-201ENST00000426573 787 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 ISCA1P6-201ENST00000427740 390 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC109583.1-201ENST00000432156 268 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC236972.1-201ENST00000433225 199 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC023347.2-201ENST00000433994 462 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 MTCO1P27-201ENST00000448269 226 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 MTCO1P42-201ENST00000457379 726 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC024589.1-201ENST00000512207 263 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 ARL2BPP5-201ENST00000523141 481 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 AL389895.1-201ENST00000554127 252 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC005261.5-201ENST00000596280 355 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC010591.1-201ENST00000603941 649 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC116447.1-201ENST00000613153 453 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC123768.4-201ENST00000616244 701 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AL732618.1-201ENST00000623251 301 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AP003122.6-201ENST00000623831 495 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 AC091905.1-201ENST00000624400 311 ntBASIC4.65□□□□□ -1.67
SYNE4Q8N205 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE4Q8N205 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE4Q8N205 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE4Q8N205 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE4Q8N205 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 AC011266.1-201ENST00000624119 3569 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 Y_RNA.1-201ENST00000352915 104 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 RNA5SP391-201ENST00000363456 119 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 RNA5SP50-201ENST00000363731 107 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 RNU6-921P-201ENST00000384361 107 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 Y_RNA.500-201ENST00000384466 111 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 DSTNP4-201ENST00000399472 474 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 RNU2-28P-201ENST00000410457 189 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 AL359704.1-201ENST00000411586 781 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 AL353193.1-201ENST00000421444 268 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 RPL36P19-201ENST00000430744 301 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 AC011742.1-201ENST00000431448 434 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 OR6K1P-201ENST00000456766 971 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 AC008155.2-201ENST00000464337 397 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 RPL32P34-201ENST00000486380 400 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 RPL30P11-201ENST00000495304 339 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 MTCO3P9-201ENST00000506989 781 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 Y_RNA.693-201ENST00000516641 110 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 Y_RNA.701-201ENST00000516812 110 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 CENPUP1-201ENST00000526649 1202 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 AL512360.1-201ENST00000555346 234 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms