Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 RNU6-928P-201ENST00000516876 104 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 TGIF1P1-201ENST00000558095 802 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 MIR4307-201ENST00000582802 84 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC006504.3-201ENST00000586818 523 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 SNORA62.6-201ENST00000606322 83 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 RNU4-89P-201ENST00000607443 133 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC100827.5-201ENST00000615883 426 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC110801.1-201ENST00000623590 212 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AP003399.1-201ENST00000637534 361 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01561Q8N1V8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2.01
LINC01561Q8N1V8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
LINC01561Q8N1V8 AL359693.1-201ENST00000614959 2407 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 MFSD8-233ENST00000641482 4860 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 RPS3AP25-201ENST00000411660 793 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 HMGB3P20-201ENST00000417997 600 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC099548.1-201ENST00000421443 426 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AL645937.1-202ENST00000421799 937 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC245028.1-201ENST00000423259 256 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 MTCO2P17-201ENST00000424336 677 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AL353705.1-201ENST00000433468 480 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC104978.1-201ENST00000449387 391 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 RN7SL610P-201ENST00000463845 291 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 RPS29P22-201ENST00000472363 168 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 KC877373.1-201ENST00000479066 408 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 ARL4AP2-201ENST00000507378 601 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 HSPE1P23-201ENST00000509838 286 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 MTND5P13-201ENST00000513046 1079 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 RNU6-1003P-201ENST00000517099 105 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 EEF1A1P37-201ENST00000522748 715 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 SUB1P1-201ENST00000524415 382 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AP000907.2-201ENST00000530827 353 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 ELOCP32-201ENST00000548625 324 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC008751.2-201ENST00000597885 980 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 Mico1.1-201ENST00000611698 204 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC004696.1-201ENST00000614345 607 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC021755.4-201ENST00000616620 456 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 AC110079.1-202ENST00000635213 138 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 OR52H1-202ENST00000641796 1061 ntBASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01561Q8N1V8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC073429.2-201ENST00000569694 1444 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC138915.1-201ENST00000565427 1685 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 Z83843.1-201ENST00000604070 3685 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 RNU6-278P-201ENST00000390945 109 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 MIR888-201ENST00000401186 77 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AL359634.1-202ENST00000404721 284 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 RN7SKP159-201ENST00000410657 292 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 RPS27AP14-201ENST00000422868 454 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC244035.1-201ENST00000430042 390 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 RPL21P89-201ENST00000444021 467 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms