Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 snoU13.4-201ENST00000458916 104 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 snoU109.4-201ENST00000458953 143 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 DSTNP2-201ENST00000504533 515 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 RNU6-1261P-201ENST00000517194 104 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 OR4P1P-201ENST00000530808 1136 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 MIR5708-201ENST00000579723 85 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AP000787.2-201ENST00000604432 568 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC092650.2-201ENST00000619984 902 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 MKKS-204ENST00000639674 192 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 ZNF663P-202ENST00000641770 1131 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3□□□□□ -1.93
CCDC65Q8IXS2 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC65Q8IXS2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC65Q8IXS2 RNU1-112P-201ENST00000364401 164 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 AL356057.2-201ENST00000403318 432 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 RNU2-28P-201ENST00000410457 189 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3□□□□□ -1.93
CCDC65Q8IXS2 UBE2D3P2-201ENST00000424409 445 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC090525.1-201ENST00000479116 478 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC004062.1-201ENST00000509926 645 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 VTRNA2-2P-201ENST00000516091 103 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 SNORA31.15-201ENST00000516771 132 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC018630.1-201ENST00000541376 925 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC008127.2-201ENST00000549925 1075 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC007954.1-201ENST00000554198 494 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC138915.2-201ENST00000569776 97 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 AL606834.3-201ENST00000602615 496 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC005000.2-201ENST00000605468 310 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC009237.15-201ENST00000610252 501 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 AC135507.2-201ENST00000612443 309 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 AL360181.4-201ENST00000621752 134 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC65Q8IXS2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3□□□□□ -1.93
CCDC65Q8IXS2 AP005901.5-201ENST00000545779 1796 ntBASIC3□□□□□ -1.93
CCDC65Q8IXS2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3□□□□□ -1.93
CCDC65Q8IXS2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 RNA5SP139-201ENST00000364340 117 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AC099677.1-201ENST00000420575 175 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 RPL7P30-201ENST00000420888 709 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 MTCO1P3-201ENST00000429327 192 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 EZH2P1-201ENST00000431167 291 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 MUPP-201ENST00000438111 566 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AC107083.1-201ENST00000439643 279 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 USP9YP34-201ENST00000453983 808 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 RN7SL297P-201ENST00000483161 293 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 RN7SKP31-201ENST00000516354 278 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 ERHP1-201ENST00000523006 310 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AC125611.1-201ENST00000549563 229 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AC079600.2-201ENST00000550076 130 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 RPL12P50-201ENST00000603116 116 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AL355810.1-201ENST00000614629 552 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AC109454.4-201ENST00000623411 649 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AC104985.3-201ENST00000623479 597 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 AP003485.1-201ENST00000625093 753 ntBASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC65Q8IXS2 TAB3P1-202ENST00000452645 1634 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 Y_RNA.408-201ENST00000383987 102 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 SNORD51-201ENST00000384320 80 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 MIR506-201ENST00000384998 124 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 MIR9-1-201ENST00000385198 89 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 MTCO3P12-201ENST00000416718 547 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 RPL23AP83-201ENST00000434984 473 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 MRPL50P4-201ENST00000446432 475 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 VN1R10P-201ENST00000447106 875 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AC092757.1-201ENST00000467293 467 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 RNU6-1095P-201ENST00000516148 108 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 SNORA31.21-201ENST00000517180 77 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms