Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL596327.1-201ENST00000603629 213 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AL133507.1-201ENST00000605269 557 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC087683.2-201ENST00000611384 326 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AL596245.1-201ENST00000618994 362 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC048347.1-201ENST00000624621 427 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AP000676.4-201ENST00000624659 623 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 CRYM-AS1-204ENST00000637983 556 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 MIR622-201ENST00000638396 96 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC091152.2-201ENST00000591628 2569 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AP001148.1-201ENST00000624124 2359 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 RNU6-931P-201ENST00000363850 107 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 RNU6-343P-201ENST00000364709 104 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC110754.1-201ENST00000399740 601 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 RSL24D1P4-201ENST00000400938 484 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 RNU2-71P-201ENST00000411395 189 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 RPL32P35-201ENST00000415214 394 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC010099.3-201ENST00000423896 409 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 OR2AS1P-201ENST00000427827 319 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 TXNL1P1-201ENST00000429528 554 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 RPL23AP83-201ENST00000434984 473 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 FTH1P1-201ENST00000437933 532 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 RPS12P18-201ENST00000442381 270 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC002381.1-201ENST00000447049 280 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 TMED11P-201ENST00000479478 690 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AL024509.2-201ENST00000493462 493 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC096751.1-202ENST00000502691 1067 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC147055.4-201ENST00000504399 745 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC093677.1-201ENST00000514414 678 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC008885.1-201ENST00000514930 301 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 SNORA3.4-201ENST00000515969 96 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC245166.1-201ENST00000521012 253 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 IGHV3-76-201ENST00000522465 295 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 COX6CP8-201ENST00000522620 226 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC239860.2-201ENST00000525886 270 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 OR6C7P-201ENST00000547875 934 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 CR383656.7-201ENST00000548164 174 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC090615.1-201ENST00000577519 154 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 MIR4506-201ENST00000584693 77 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC006539.2-201ENST00000601729 572 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AL031176.1-201ENST00000604554 466 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC004853.1-201ENST00000604902 698 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC009159.2-201ENST00000617603 606 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AP000770.2-201ENST00000623694 100 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC007490.1-201ENST00000624321 703 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC103706.2-201ENST00000638080 240 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 AC005183.1-201ENST00000603687 1979 ntBASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
C9orf40Q8IXQ3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 CYCSP45-201ENST00000402289 315 ntBASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 PIGPP2-201ENST00000411569 458 ntBASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 SDCBPP3-201ENST00000419629 891 ntBASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 AL137014.1-201ENST00000420490 1226 ntBASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 AC079780.1-201ENST00000428259 207 ntBASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 OR2B8P-201ENST00000432841 938 ntBASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.85□□□□□ -1.95
C9orf40Q8IXQ3 SNRPEP7-201ENST00000438350 220 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms