Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC016397.1-201ENST00000412463 242 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 E2F6P2-201ENST00000420708 748 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC004938.1-201ENST00000438468 308 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC011753.3-201ENST00000443436 406 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AL162591.2-201ENST00000449634 317 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 RPL36AP13-201ENST00000457490 317 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 HMGB1P25-201ENST00000468402 607 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 VN1R17P-201ENST00000472048 1090 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC027575.1-201ENST00000481064 460 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC025164.1-201ENST00000496249 478 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 MTND5P5-201ENST00000503764 376 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-1045P-201ENST00000516321 107 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 RN7SKP92-201ENST00000517266 244 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 TRMT10BP1-201ENST00000519377 943 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 RAB9BP1-201ENST00000519581 626 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 HIGD1AP5-201ENST00000529959 259 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 RN7SL690P-201ENST00000582087 240 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AL022345.1-201ENST00000607292 135 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 DUSP12P1-201ENST00000612874 516 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC134503.1-201ENST00000633048 54 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 ZNF137P-201ENST00000456718 1920 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AP001350.1-201ENST00000601906 1524 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC027228.2-201ENST00000567141 2154 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 SNORA56-201ENST00000383966 129 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 RNA5SP332-201ENST00000391063 115 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 GLULP6-201ENST00000399502 913 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 RNU4-78P-201ENST00000410940 126 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AL391219.1-201ENST00000422570 483 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AL645608.4-201ENST00000423619 154 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 RPL23AP38-201ENST00000423801 469 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 GPM6BP2-201ENST00000432046 144 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 H2AFZP6-201ENST00000444403 394 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 GPM6BP1-201ENST00000446387 144 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 CEACAMP6-201ENST00000452007 574 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 RNU7-66P-201ENST00000459469 62 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 RPL23AP11-201ENST00000475260 469 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 RN7SL459P-201ENST00000481078 302 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC090686.1-201ENST00000481577 749 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC104806.1-201ENST00000508720 308 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-1170P-201ENST00000515974 106 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-864P-201ENST00000516256 108 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 RN7SKP82-201ENST00000516786 223 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-1088P-201ENST00000516850 104 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 DEFB109D-201ENST00000529497 240 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AP000763.2-201ENST00000540641 163 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AP001330.4-201ENST00000604350 154 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AL031176.1-201ENST00000604554 466 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 APOOP1-201ENST00000604695 592 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC245389.1-201ENST00000605141 529 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC012443.1-201ENST00000605605 231 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC093838.1-201ENST00000613014 469 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AC040896.1-201ENST00000613819 479 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM48Q8IWZ4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms