Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 MCTS2P-201ENST00000394552 546 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 ARF4P3-201ENST00000397387 509 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AL356057.3-201ENST00000402607 340 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AL139098.1-201ENST00000407291 389 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 MTCO3P2-201ENST00000457365 171 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC008571.1-201ENST00000467232 300 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 SRIP1-201ENST00000489235 288 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC093801.2-201ENST00000503966 1050 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 EEF1B2P4-201ENST00000551398 348 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 EIF4BP1-201ENST00000554881 351 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC023825.1-201ENST00000566704 1030 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC055876.5-201ENST00000605667 259 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AC024560.3-201ENST00000608482 349 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 VN1R7P-201ENST00000619242 903 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 AL137790.1-201ENST00000634283 177 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 NUP58P1-201ENST00000502546 1738 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 ZNF519P1-201ENST00000449011 1626 ntBASIC2.68□□□□□ -1.98
CDKL3Q8IVW4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 RNU6-582P-201ENST00000362989 107 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 SNORD116-23-201ENST00000384645 92 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AL360182.1-201ENST00000397433 468 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AL139095.1-201ENST00000404326 391 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 TMEM167AP1-201ENST00000423409 219 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AC013262.1-201ENST00000426710 252 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AL831737.1-201ENST00000441288 271 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 HMGN1P5-201ENST00000448591 263 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 snoU109.4-201ENST00000458953 143 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AC016550.1-201ENST00000505348 785 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AC010625.1-201ENST00000511296 403 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 RNU6-885P-201ENST00000516607 104 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 RNA5SP135-201ENST00000517019 125 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AP003102.1-201ENST00000525638 661 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AP003066.2-201ENST00000529375 555 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 LARP7P3-201ENST00000579888 337 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AC090330.1-201ENST00000588646 764 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AP001542.2-201ENST00000593141 364 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 RPL12P50-201ENST00000603116 116 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AC010738.1-201ENST00000604970 987 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 AC106900.2-201ENST00000604994 317 ntBASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDKL3Q8IVW4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AP000526.1-201ENST00000603308 1388 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 U3.29-201ENST00000391296 212 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AL024474.1-201ENST00000404655 591 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 FCF1P2-201ENST00000415284 583 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 RPLP0P7-201ENST00000416050 667 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 USP9YP20-201ENST00000419224 558 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC079780.1-201ENST00000428259 207 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC107083.1-201ENST00000439643 279 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC093767.1-201ENST00000504523 156 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 MTND5P4-201ENST00000514978 288 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC112198.4-201ENST00000515450 351 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 RNA5SP282-201ENST00000516355 108 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 MTCO1P47-201ENST00000523889 1271 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms