Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AL138820.1-201ENST00000617901 5305 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 Y_RNA.105-201ENST00000363182 111 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 SNORA74A-201ENST00000364089 198 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 MIR548H3-201ENST00000408771 118 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 RN7SKP16-201ENST00000410180 299 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 RNU2-33P-201ENST00000410344 192 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 PSMA2P3-201ENST00000429685 675 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 PPIAP13-201ENST00000434706 478 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 RHOT1P3-201ENST00000436571 331 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC016696.1-201ENST00000446949 318 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 LINC01399-202ENST00000458450 244 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 RNU7-59P-201ENST00000459101 61 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 RN7SL826P-201ENST00000479724 288 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC093767.1-201ENST00000504523 156 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 RNU5B-3P-201ENST00000516601 115 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 RNU6-64P-201ENST00000517119 105 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AL133271.1-201ENST00000538229 291 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC006600.1-201ENST00000572529 153 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC008521.1-201ENST00000587471 187 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC008162.1-201ENST00000604718 254 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AL670379.4-201ENST00000605279 254 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC012443.1-201ENST00000605605 231 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AP005432.2-201ENST00000608162 586 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC009570.1-201ENST00000609599 745 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 RPSAP73-201ENST00000614820 330 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AL138825.1-201ENST00000618587 192 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC134882.1-201ENST00000603738 1676 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC107021.2-201ENST00000567714 2095 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 AC108751.5-201ENST00000492880 1336 ntBASIC4.69□□□□□ -1.66
ATG4DQ86TL0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4DQ86TL0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 RNU6-398P-201ENST00000384143 109 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 SNORA51.11-201ENST00000384442 131 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 DUTP5-201ENST00000406790 469 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AL451074.5-201ENST00000415894 435 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 RPL23AP69-201ENST00000431134 458 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AL353997.1-201ENST00000432936 108 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 RPL21P112-201ENST00000434403 463 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 NDUFB1P2-201ENST00000449477 176 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AL031274.1-201ENST00000450334 232 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 RNU7-167P-201ENST00000459160 62 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 RNU7-169P-201ENST00000459456 61 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AL139099.1-201ENST00000497398 403 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC093852.1-201ENST00000503587 266 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 RANP3-201ENST00000530970 276 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC025423.5-201ENST00000550230 219 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms