Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 AP004242.1-201ENST00000533701 349 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 AL354943.1-201ENST00000572103 781 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 SNORD53B-201ENST00000577887 78 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 AC002984.1-201ENST00000591692 448 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 AC004943.3-201ENST00000624116 600 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 RNU6-342P-201ENST00000384521 104 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 AL513321.1-201ENST00000441175 761 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 AC019159.1-201ENST00000605094 187 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 AL118496.1-201ENST00000440201 1812 ntBASIC1.04□□□□□ -2.24
VPS13BQ7Z7G8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 MTND4P13-201ENST00000402078 1023 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC092473.1-201ENST00000441098 221 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 RPS15AP36-201ENST00000492022 382 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 SNORA31.15-201ENST00000516771 132 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC234775.3-201ENST00000564612 656 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 MIR4512-201ENST00000583257 77 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC010678.1-201ENST00000614118 713 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC245100.2-201ENST00000454544 1679 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC073310.1-201ENST00000423226 1033 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AL513185.2-201ENST00000425543 193 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 OR4G1P-203ENST00000641984 1631 ntBASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS13BQ7Z7G8 SNORD48-201ENST00000364953 64 ntBASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 AF274854.1-201ENST00000413236 615 ntBASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 RPL7P5-201ENST00000471472 736 ntBASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 AC084851.1-201ENST00000529105 249 ntBASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 PSMA3P-201ENST00000555485 635 ntBASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 ZNF192P1-203ENST00000565888 810 ntBASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 AL133393.1-201ENST00000603277 287 ntBASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 AC016877.3-201ENST00000606778 504 ntBASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.03□□□□□ -2.25
VPS13BQ7Z7G8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 Z98749.2-208ENST00000381646 500 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 HMGB1P12-201ENST00000438594 598 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 MED6P1-201ENST00000439659 713 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC022634.1-201ENST00000520765 532 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AL731537.2-201ENST00000561565 951 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 RPL23AP88-201ENST00000605759 454 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 SNRPFP4-201ENST00000456366 242 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 HMGN1P7-201ENST00000491722 313 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 ATP5EP1-201ENST00000510257 156 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AP002748.2-201ENST00000528671 348 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 MIR151B-201ENST00000584249 96 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC138649.5-201ENST00000637456 137 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC011155.1-201ENST00000316512 456 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 RPL23AP39-201ENST00000415533 405 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AL138785.1-201ENST00000425821 331 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 MTCO3P30-201ENST00000426425 670 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 CALM1P2-201ENST00000452941 448 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 HMGN1P28-201ENST00000521340 364 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC024614.2-201ENST00000577584 372 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC006270.2-201ENST00000578523 652 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC080078.3-201ENST00000605407 463 ntBASIC1.02□□□□□ -2.25
VPS13BQ7Z7G8 AC073348.1-201ENST00000623002 331 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms