Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 RNU6-28P-201ENST00000362378 107 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 RNU5F-6P-201ENST00000362979 116 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 U8.14-201ENST00000390843 143 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 RPL17P12-201ENST00000413391 526 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 JKAMPP1-201ENST00000413804 919 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 RPL31P45-201ENST00000419532 356 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 PSMA6P3-201ENST00000428242 164 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 SETP5-201ENST00000437270 562 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC026801.2-201ENST00000515352 425 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 COX6CP8-201ENST00000522620 226 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 RFPL1S-203ENST00000539579 330 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 CENPUP2-201ENST00000555897 1186 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC012213.3-201ENST00000577199 777 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AP001180.3-201ENST00000582221 145 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC020914.4-201ENST00000597690 277 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC012065.4-201ENST00000602445 679 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC025946.2-201ENST00000603398 234 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AP000254.1-201ENST00000609934 520 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC025594.3-201ENST00000613068 790 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC027807.2-201ENST00000616099 408 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC093591.3-201ENST00000634516 308 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AC068647.1-201ENST00000489539 2265 ntBASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRT28Q7Z3Y7 AL592437.2-201ENST00000421655 2434 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC097714.1-201ENST00000511272 1647 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 RNA5SP235-201ENST00000365411 114 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 RN7SKP266-201ENST00000410232 287 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 MUPP-201ENST00000438111 566 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 HMGB1P15-201ENST00000453854 435 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 OR6K1P-201ENST00000456766 971 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 RNA5SP269-201ENST00000459032 137 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC104563.1-201ENST00000476147 376 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 S100A11P1-201ENST00000477525 312 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AP000797.1-201ENST00000478870 387 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 KC877373.1-201ENST00000479066 408 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC025445.1-201ENST00000502728 300 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 RN7SKP116-201ENST00000516902 319 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 OR5AP1P-201ENST00000529730 940 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC091489.2-201ENST00000566263 604 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 MIR544B-201ENST00000582372 78 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC087752.4-201ENST00000605911 462 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AP003117.2-201ENST00000606010 545 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC073968.1-201ENST00000618594 637 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC233309.1-201ENST00000619522 751 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 AC110801.1-201ENST00000623590 212 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 MAPK10-253ENST00000641010 4072 ntBASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT28Q7Z3Y7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 NUP58P1-201ENST00000502546 1738 ntBASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 RNU4-91P-201ENST00000364778 135 ntBASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 SNORA70E-201ENST00000384492 135 ntBASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 MTND4LP20-201ENST00000402379 270 ntBASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 AL138880.1-201ENST00000405824 642 ntBASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 MIR1305-201ENST00000408300 86 ntBASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 ZNF885P-201ENST00000420174 1098 ntBASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 AC006366.1-201ENST00000422002 759 ntBASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 AC006989.1-201ENST00000427212 131 ntBASIC4.47□□□□□ -1.69
KRT28Q7Z3Y7 AL590233.1-201ENST00000430017 456 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms