Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 AL121821.2-201ENST00000556081 394 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AC011712.1-201ENST00000588959 234 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AL391646.1-201ENST00000603860 190 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
VPS13CQ709C8 AC008568.2-201ENST00000623862 2313 ntBASIC1.28□□□□□ -2.2
VPS13CQ709C8 BTBD10P2-201ENST00000404779 676 ntBASIC1.28□□□□□ -2.2
VPS13CQ709C8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS13CQ709C8 NEK4P1-201ENST00000433383 879 ntBASIC1.28□□□□□ -2.2
VPS13CQ709C8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS13CQ709C8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS13CQ709C8 FAM106DP-201ENST00000586416 501 ntBASIC1.28□□□□□ -2.2
VPS13CQ709C8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
VPS13CQ709C8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS13CQ709C8 BX510359.4-201ENST00000423750 193 ntBASIC1.28□□□□□ -2.2
VPS13CQ709C8 AL513185.2-201ENST00000425543 193 ntBASIC1.28□□□□□ -2.2
VPS13CQ709C8 IPMKP1-201ENST00000425988 855 ntBASIC1.28□□□□□ -2.2
VPS13CQ709C8 AL353093.1-201ENST00000441292 436 ntBASIC1.28□□□□□ -2.2
VPS13CQ709C8 RPL23AP20-201ENST00000447965 421 ntBASIC1.28□□□□□ -2.2
VPS13CQ709C8 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.28□□□□□ -2.2
VPS13CQ709C8 AC006023.2-201ENST00000609916 167 ntBASIC1.28□□□□□ -2.2
VPS13CQ709C8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS13CQ709C8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS13CQ709C8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS13CQ709C8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS13CQ709C8 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
VPS13CQ709C8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.28□□□□□ -2.21
VPS13CQ709C8 AL136133.1-201ENST00000413694 376 ntBASIC1.28□□□□□ -2.21
VPS13CQ709C8 AC093084.1-201ENST00000424233 687 ntBASIC1.28□□□□□ -2.21
VPS13CQ709C8 FTH1P12-201ENST00000432137 551 ntBASIC1.28□□□□□ -2.21
VPS13CQ709C8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.28□□□□□ -2.21
VPS13CQ709C8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.28□□□□□ -2.21
VPS13CQ709C8 KATNBL1P1-201ENST00000605192 748 ntBASIC1.28□□□□□ -2.21
VPS13CQ709C8 RN7SKP101-201ENST00000411376 320 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 RNU6-516P-201ENST00000411381 104 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS13CQ709C8 AL049838.1-201ENST00000563647 981 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 MTATP6P3-201ENST00000581686 676 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC013444.2-201ENST00000603317 787 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 AL157834.3-201ENST00000615543 103 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC066616.2-201ENST00000559334 1481 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 RNU1-22P-201ENST00000363334 158 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 RNU6-882P-201ENST00000391025 103 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 RPS3AP22-201ENST00000488297 769 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC090071.1-201ENST00000507713 644 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC098848.2-201ENST00000588023 330 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC009541.1-201ENST00000438279 2662 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 NUP58P1-201ENST00000502546 1738 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS13CQ709C8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13CQ709C8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13CQ709C8 MTND4P13-201ENST00000402078 1023 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS13CQ709C8 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13CQ709C8 AC016727.2-201ENST00000603988 621 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 MIR502-201ENST00000606349 86 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 VN1R74P-201ENST00000613259 503 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 MTND5P7-201ENST00000413558 1798 ntBASIC1.27□□□□□ -2.21
VPS13CQ709C8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13CQ709C8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VPS13CQ709C8 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS13CQ709C8 FAM35CP-201ENST00000554755 2470 ntBASIC1.26□□□□□ -2.21
VPS13CQ709C8 RNA5SP139-201ENST00000364340 117 ntBASIC1.26□□□□□ -2.21
VPS13CQ709C8 AF274854.1-201ENST00000413236 615 ntBASIC1.26□□□□□ -2.21
VPS13CQ709C8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13CQ709C8 AC090819.1-201ENST00000523800 1111 ntBASIC1.26□□□□□ -2.21
VPS13CQ709C8 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13CQ709C8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VPS13CQ709C8 RPS27P5-201ENST00000444247 244 ntBASIC1.26□□□□□ -2.21
VPS13CQ709C8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VPS13CQ709C8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13CQ709C8 MIR6788-201ENST00000618842 66 ntBASIC1.26□□□□□ -2.21
VPS13CQ709C8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13CQ709C8 HSPD1P16-201ENST00000402302 394 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC112191.3-201ENST00000604371 277 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
VPS13CQ709C8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
VPS13CQ709C8 RNU6-249P-201ENST00000363016 102 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC234781.2-201ENST00000426370 994 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 snoU13.3-201ENST00000459441 104 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC078918.1-201ENST00000498515 228 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC019176.1-201ENST00000518519 225 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS13CQ709C8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS13CQ709C8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
VPS13CQ709C8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS13CQ709C8 HMGB3P26-201ENST00000560051 582 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms