Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 RNU6-174P-201ENST00000410406 106 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AC092638.1-201ENST00000411966 1275 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AC013404.1-201ENST00000413068 249 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 PAICSP7-201ENST00000419829 962 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 TOMM22P6-201ENST00000465035 409 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AC090071.1-201ENST00000507713 644 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 SNORA31.11-201ENST00000516528 139 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 MIR6895-201ENST00000613497 78 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 RPS7P2-201ENST00000435134 607 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 BNIP3P2-201ENST00000441221 577 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AC239860.2-201ENST00000525886 270 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 MIR4458-201ENST00000578872 75 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 SNORD39.2-201ENST00000579995 76 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AC090425.2-201ENST00000608818 501 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AC104307.1-201ENST00000616142 196 ntBASIC2.05□□□□□ -2.08
UBR3Q6ZT12 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.05□□□□□ -2.08
UBR3Q6ZT12 RPL17P12-201ENST00000413391 526 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 USP9YP6-201ENST00000413550 854 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 FO393414.1-201ENST00000428697 1184 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 MTCO1P43-201ENST00000431831 488 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 USP9YP34-201ENST00000453983 808 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 OR7L1P-201ENST00000456181 380 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 PPP1R2P5-201ENST00000457256 603 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 ARPC3P2-201ENST00000457786 533 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 AC104472.2-201ENST00000469035 601 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
UBR3Q6ZT12 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
UBR3Q6ZT12 RPS15AP36-201ENST00000492022 382 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.04□□□□□ -2.08
UBR3Q6ZT12 AC007375.1-201ENST00000554513 578 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 AL049838.1-201ENST00000563647 981 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 AC015720.1-201ENST00000565251 277 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 AC010200.2-201ENST00000605098 235 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
UBR3Q6ZT12 AC092159.4-201ENST00000624944 550 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.04□□□□□ -2.08
UBR3Q6ZT12 MTCO1P6-201ENST00000481192 1384 ntBASIC2.04□□□□□ -2.08
UBR3Q6ZT12 SNORA16.1-201ENST00000364597 132 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.03□□□□□ -2.08
UBR3Q6ZT12 USP9YP27-201ENST00000418455 438 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC023128.2-201ENST00000420880 1223 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 BX510359.4-201ENST00000423750 193 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC009965.2-201ENST00000425328 970 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC009238.1-201ENST00000442165 424 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC009237.6-201ENST00000446969 424 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC079203.1-201ENST00000487972 404 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.03□□□□□ -2.08
UBR3Q6ZT12 RNA5SP480-201ENST00000516840 109 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 RNA5SP102-201ENST00000516865 106 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC019159.1-201ENST00000605094 187 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC007620.3-201ENST00000608131 497 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC105429.2-201ENST00000610567 517 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AL121594.5-201ENST00000631724 573 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 AC002546.1-201ENST00000588041 2504 ntBASIC2.03□□□□□ -2.08
UBR3Q6ZT12 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
UBR3Q6ZT12 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
UBR3Q6ZT12 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
UBR3Q6ZT12 HMGB1P10-201ENST00000395823 563 ntBASIC2.03□□□□□ -2.09
UBR3Q6ZT12 MTND2P16-201ENST00000419987 799 ntBASIC2.03□□□□□ -2.09
UBR3Q6ZT12 WARS2P1-201ENST00000429678 537 ntBASIC2.03□□□□□ -2.09
UBR3Q6ZT12 RPL23AP16-201ENST00000441715 421 ntBASIC2.03□□□□□ -2.09
UBR3Q6ZT12 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.03□□□□□ -2.09
UBR3Q6ZT12 RAC1P5-201ENST00000512182 576 ntBASIC2.03□□□□□ -2.09
UBR3Q6ZT12 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
UBR3Q6ZT12 Y_RNA.327-201ENST00000365201 102 ntBASIC2.02□□□□□ -2.09
UBR3Q6ZT12 XKRYP4-201ENST00000414395 483 ntBASIC2.02□□□□□ -2.09
UBR3Q6ZT12 HMGN2P20-201ENST00000437531 273 ntBASIC2.02□□□□□ -2.09
UBR3Q6ZT12 XKRYP5-201ENST00000449659 483 ntBASIC2.02□□□□□ -2.09
UBR3Q6ZT12 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.02□□□□□ -2.09
UBR3Q6ZT12 RNU6-56P-201ENST00000516986 93 ntBASIC2.02□□□□□ -2.09
UBR3Q6ZT12 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.02□□□□□ -2.09
UBR3Q6ZT12 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.02□□□□□ -2.09
UBR3Q6ZT12 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.01□□□□□ -2.09
UBR3Q6ZT12 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
UBR3Q6ZT12 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
UBR3Q6ZT12 RNU1-42P-201ENST00000364033 160 ntBASIC2.01□□□□□ -2.09
UBR3Q6ZT12 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.01□□□□□ -2.09
UBR3Q6ZT12 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.01□□□□□ -2.09
UBR3Q6ZT12 AC092436.3-201ENST00000511788 257 ntBASIC2.01□□□□□ -2.09
UBR3Q6ZT12 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.01□□□□□ -2.09
UBR3Q6ZT12 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.01□□□□□ -2.09
UBR3Q6ZT12 SNORD53B-201ENST00000577887 78 ntBASIC2.01□□□□□ -2.09
UBR3Q6ZT12 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
UBR3Q6ZT12 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
UBR3Q6ZT12 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
UBR3Q6ZT12 AP000567.1-201ENST00000406413 156 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms