Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
RTL4Q6ZR62 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.57□□□□□ -2
RTL4Q6ZR62 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RTL4Q6ZR62 AC092593.1-201ENST00000515413 1815 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AC011460.1-201ENST00000636268 1834 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RTL4Q6ZR62 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
RTL4Q6ZR62 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RTL4Q6ZR62 MIR627-201ENST00000384979 97 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AL512633.1-201ENST00000399931 655 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AL138827.1-201ENST00000402666 306 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AL355615.1-201ENST00000406187 641 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.56□□□□□ -2
RTL4Q6ZR62 Z93242.1-201ENST00000427102 353 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.56□□□□□ -2
RTL4Q6ZR62 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.56□□□□□ -2
RTL4Q6ZR62 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.56□□□□□ -2
RTL4Q6ZR62 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.56□□□□□ -2
RTL4Q6ZR62 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.56□□□□□ -2
RTL4Q6ZR62 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.56□□□□□ -2
RTL4Q6ZR62 NAMPTP2-201ENST00000505629 1115 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.56□□□□□ -2
RTL4Q6ZR62 snoZ278.1-201ENST00000517059 112 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.56□□□□□ -2
RTL4Q6ZR62 AP003355.1-201ENST00000518956 587 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 OR4R2P-201ENST00000530815 597 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.56□□□□□ -2
RTL4Q6ZR62 CYB5AP5-201ENST00000549779 389 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AC008127.2-201ENST00000549925 1075 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.56□□□□□ -2
RTL4Q6ZR62 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.56□□□□□ -2
RTL4Q6ZR62 LARP7P2-201ENST00000575306 125 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RTL4Q6ZR62 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.56□□□□□ -2
RTL4Q6ZR62 U73023.1-201ENST00000603134 700 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AL355810.1-201ENST00000614629 552 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AC091925.2-201ENST00000625059 256 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.56□□□□□ -2
RTL4Q6ZR62 AC026634.1-201ENST00000634369 198 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.56□□□□□ -2
RTL4Q6ZR62 DBF4P1-201ENST00000412976 1892 ntBASIC2.56□□□□□ -2
RTL4Q6ZR62 AL355596.1-201ENST00000565399 3996 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.55□□□□□ -2
RTL4Q6ZR62 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RTL4Q6ZR62 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.55□□□□□ -2
RTL4Q6ZR62 AC099677.1-201ENST00000420575 175 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.55□□□□□ -2
RTL4Q6ZR62 MTCO3P1-205ENST00000422088 832 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.55□□□□□ -2
RTL4Q6ZR62 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.55□□□□□ -2
RTL4Q6ZR62 SGO1P2-201ENST00000429458 1589 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.55□□□□□ -2
RTL4Q6ZR62 MRPL42P4-201ENST00000453267 443 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 AC244505.3-201ENST00000454598 187 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.55□□□□□ -2
RTL4Q6ZR62 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.55□□□□□ -2
RTL4Q6ZR62 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.55□□□□□ -2
RTL4Q6ZR62 AC090525.1-201ENST00000479116 478 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 AC093801.2-201ENST00000503966 1050 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.55□□□□□ -2
RTL4Q6ZR62 AC069306.1-201ENST00000507006 843 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 RN7SKP132-201ENST00000516001 208 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.55□□□□□ -2
RTL4Q6ZR62 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.55□□□□□ -2
RTL4Q6ZR62 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.55□□□□□ -2
RTL4Q6ZR62 AC122134.1-202ENST00000569111 1201 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.55□□□□□ -2
RTL4Q6ZR62 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.55□□□□□ -2
RTL4Q6ZR62 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.55□□□□□ -2
RTL4Q6ZR62 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.55□□□□□ -2
RTL4Q6ZR62 ZNF861P-201ENST00000588126 639 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 AC055876.5-201ENST00000605667 259 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 AC007619.2-201ENST00000605743 379 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 AC092954.1-201ENST00000609121 445 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 AC007998.5-201ENST00000622938 237 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 AC135776.4-201ENST00000624300 1904 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 AC080188.3-201ENST00000624842 748 ntBASIC2.55□□□□□ -2
RTL4Q6ZR62 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTL4Q6ZR62 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTL4Q6ZR62 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RTL4Q6ZR62 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTL4Q6ZR62 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTL4Q6ZR62 MTCO1P23-201ENST00000415223 1526 ntBASIC2.54□□□□□ -2
RTL4Q6ZR62 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RTL4Q6ZR62 GDI2P1-201ENST00000429312 1336 ntBASIC2.54□□□□□ -2
RTL4Q6ZR62 HMGB1P5-201ENST00000255320 642 ntBASIC2.54□□□□□ -2
RTL4Q6ZR62 SNORA63.3-201ENST00000362682 132 ntBASIC2.54□□□□□ -2
RTL4Q6ZR62 RNU5B-4P-201ENST00000363508 111 ntBASIC2.54□□□□□ -2
RTL4Q6ZR62 MIR9-1-201ENST00000385198 89 ntBASIC2.54□□□□□ -2
RTL4Q6ZR62 RNA5SP252-201ENST00000391131 119 ntBASIC2.54□□□□□ -2
RTL4Q6ZR62 AL603865.2-201ENST00000401679 213 ntBASIC2.54□□□□□ -2
RTL4Q6ZR62 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTL4Q6ZR62 RNA5SP21-201ENST00000410917 96 ntBASIC2.54□□□□□ -2
RTL4Q6ZR62 RNA5SP184-201ENST00000411071 108 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms