Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 MTCO2P22-201ENST00000603246 681 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 VN1R9P-201ENST00000614184 867 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 DUXAP9-208ENST00000622815 614 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 PISRT1-201ENST00000626175 531 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 MTND5P29-201ENST00000458676 1807 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 AC002543.1-201ENST00000299783 1954 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 AC022031.1-201ENST00000585985 2593 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 AL035407.2-201ENST00000454090 378 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 MTCYBP14-201ENST00000457471 715 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 TRBV1-201ENST00000476502 284 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 RPS15AP34-201ENST00000487776 387 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 MTAPP1-201ENST00000489154 819 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 RPL38P4-201ENST00000502376 214 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 AC111000.5-201ENST00000506559 1178 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 AC114322.1-201ENST00000506771 926 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 AC025768.1-201ENST00000510057 267 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 FABP5P6-201ENST00000510588 409 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 FAM92A1P1-201ENST00000528023 890 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 MTCYBP28-201ENST00000566728 1132 ntBASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CCDC171Q6TFL3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 U3.40-201ENST00000408706 208 ntBASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 AC096533.1-201ENST00000411645 353 ntBASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 AC096992.1-201ENST00000459808 709 ntBASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 AC090515.1-201ENST00000465295 476 ntBASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 CIR1P1-201ENST00000524055 1133 ntBASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 MTND2P26-201ENST00000528255 1029 ntBASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 AC103710.2-201ENST00000609912 942 ntBASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 AC006963.1-201ENST00000624003 1052 ntBASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC171Q6TFL3 AC131280.1-202ENST00000624067 4211 ntBASIC2.34□□□□□ -2.03
CCDC171Q6TFL3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC171Q6TFL3 HMGB1P5-201ENST00000255320 642 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 MIR764-201ENST00000390811 85 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 MTCYBP24-201ENST00000420387 1106 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AC003685.2-201ENST00000422795 395 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 UBE2V1P6-201ENST00000430840 422 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AC108210.2-201ENST00000503681 201 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AC113155.1-201ENST00000511141 769 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AP003717.3-201ENST00000544832 1180 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AMZ2P1-203ENST00000565833 850 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 MIR4769-201ENST00000584126 77 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AC025811.1-201ENST00000604312 472 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 VN1R74P-201ENST00000613259 503 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 uc_338.20-201ENST00000621563 178 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.34□□□□□ -2.04
CCDC171Q6TFL3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 AC010680.1-201ENST00000590024 3590 ntBASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 AL591806.2-201ENST00000433122 173 ntBASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 AL031183.1-201ENST00000457667 207 ntBASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 RAC1P5-201ENST00000512182 576 ntBASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 COX6CP5-201ENST00000527162 228 ntBASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 AC244517.12-201ENST00000623581 663 ntBASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 AC020923.1-201ENST00000624021 917 ntBASIC2.33□□□□□ -2.04
CCDC171Q6TFL3 AL359715.4-201ENST00000606629 1436 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 AC090740.1-201ENST00000623193 2262 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 RNU6-629P-201ENST00000384061 103 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 RNU2-40P-201ENST00000410833 196 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 RABEPKP1-201ENST00000440529 1026 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 IPO7P1-201ENST00000442031 636 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 IFNA11P-201ENST00000446352 526 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms