Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC009902.3-201ENST00000606235 2172 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC058791.1-201ENST00000608412 3198 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AL359837.1-201ENST00000381357 287 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 SNORD21-201ENST00000383953 95 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 BTF3L4P3-201ENST00000418879 476 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AL645937.1-202ENST00000421799 937 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC009296.1-201ENST00000443146 155 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 FAM103A2P-201ENST00000444122 354 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 GAPDHP27-201ENST00000447427 1020 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC006480.1-201ENST00000449887 378 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 SNORA84-201ENST00000459229 133 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 SNORA31.21-201ENST00000517180 77 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AP000926.4-201ENST00000527351 454 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 MTCO2P15-201ENST00000532655 656 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AL121766.1-201ENST00000547436 487 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC087465.1-201ENST00000560574 245 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AGGF1P5-201ENST00000567900 919 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 UBE2L4-201ENST00000587688 464 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC020914.6-201ENST00000594327 272 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 KLKP1-201ENST00000595979 403 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC008739.2-201ENST00000597006 317 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AL137849.1-201ENST00000604767 169 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 MIR92B-201ENST00000607575 96 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AC013476.2-201ENST00000614456 459 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 MIR6500-201ENST00000622700 86 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 AL158801.5-201ENST00000623123 465 ntBASIC3.22□□□□□ -1.89
C11orf88Q6PI97 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.22□□□□□ -1.89
C11orf88Q6PI97 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
C11orf88Q6PI97 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.21□□□□□ -1.89
C11orf88Q6PI97 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 RNA5SP97-201ENST00000365006 84 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 RNU6-741P-201ENST00000383889 107 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 RPL32P23-201ENST00000397237 405 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC110754.1-201ENST00000399740 601 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AL136116.1-201ENST00000403591 381 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 CYCSP19-201ENST00000411715 316 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 VN1R34P-201ENST00000447387 883 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC020699.1-201ENST00000505161 445 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 RNU5A-4P-201ENST00000516588 111 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC105185.1-201ENST00000518705 535 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC023538.1-201ENST00000534576 736 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 TGIF1P1-201ENST00000558095 802 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AMZ2P1-203ENST00000565833 850 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC120057.2-201ENST00000571520 271 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 MIR6868-201ENST00000611215 58 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AL392048.1-201ENST00000613946 534 ntBASIC3.21□□□□□ -1.9
C11orf88Q6PI97 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.21□□□□□ -1.9
C11orf88Q6PI97 AC009464.1-201ENST00000615731 469 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms