Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 SAGE2P-201ENST00000420011 2126 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 Y_RNA.148-201ENST00000363557 117 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-522P-201ENST00000364497 107 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 UBBP2-201ENST00000376781 231 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-441P-201ENST00000384545 106 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AL121834.1-202ENST00000404494 277 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 RNU4-26P-201ENST00000410270 107 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 EIF4HP2-201ENST00000424380 563 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 COX6CP15-201ENST00000426313 211 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC096632.1-201ENST00000427395 310 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC079781.2-201ENST00000446424 169 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 MRPS31P2-201ENST00000451581 518 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC012671.1-201ENST00000451912 203 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 HMGB3P21-201ENST00000452483 547 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 SNORD116-26-201ENST00000516006 96 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 RN7SKP82-201ENST00000516786 223 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-410P-201ENST00000517006 107 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC068993.1-201ENST00000546724 589 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 CYP2C61P-201ENST00000604072 290 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC005014.2-201ENST00000607795 599 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC092807.2-201ENST00000609367 243 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 RMST_9.1-201ENST00000619945 193 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 MTND5P28-201ENST00000438005 1594 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 AC093535.2-201ENST00000624769 2326 ntBASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CNKSR3Q6P9H4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AL158163.1-201ENST00000603915 1649 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC104623.2-202ENST00000623477 4002 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 Y_RNA.373-201ENST00000365600 103 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-38P-201ENST00000384085 107 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 MIR3065-201ENST00000390137 79 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 ARF4P3-201ENST00000397387 509 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 RPL7P60-201ENST00000397636 735 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AL031679.1-201ENST00000400616 525 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 MIR1302-3-201ENST00000408128 138 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-985P-201ENST00000410182 104 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 RN7SKP247-201ENST00000411094 308 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 RPS15AP12-201ENST00000419498 388 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-333P-201ENST00000459117 107 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC034236.1-201ENST00000469891 373 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC087879.1-201ENST00000474343 374 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 RPL21P99-201ENST00000480369 423 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AF213884.1-201ENST00000488102 463 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 HMGB1P30-201ENST00000492455 606 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AP002812.1-201ENST00000495378 474 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC090453.1-201ENST00000495560 436 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC018797.3-201ENST00000513388 1241 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 Y_RNA.682-201ENST00000516457 100 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AP001804.3-201ENST00000525146 880 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC068446.3-201ENST00000555285 382 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC008269.2-201ENST00000561915 1105 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms