Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AP001486.2-201ENST00000561652 5113 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 Y_RNA.279-201ENST00000364763 95 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 RNU6-441P-201ENST00000384545 106 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 EIF5P1-201ENST00000400019 1231 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AL356967.1-201ENST00000406305 431 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AL356776.1-201ENST00000406574 447 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 HSPE1P8-201ENST00000406997 288 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 RNU6-908P-201ENST00000410160 94 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 RWDD4P2-201ENST00000426392 563 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC104850.1-201ENST00000435940 476 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC002381.1-201ENST00000447049 280 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AP000893.1-201ENST00000474462 794 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 Y_RNA.672-201ENST00000516289 104 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AF235103.2-201ENST00000525753 346 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AP003034.1-201ENST00000534621 422 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AL138976.2-201ENST00000563989 694 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC005261.5-201ENST00000596280 355 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC020910.2-201ENST00000603635 610 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AL359999.1-201ENST00000604513 294 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC087045.1-201ENST00000605856 382 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC010133.1-201ENST00000615809 842 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 ZYXP1-201ENST00000617638 118 ntBASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF549Q6P9A3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 RNU6-1085P-201ENST00000363576 107 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 SNORA51.6-201ENST00000384151 125 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 Y_RNA.535-201ENST00000384612 99 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC004975.1-201ENST00000428733 208 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC133104.1-201ENST00000429100 218 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 FCF1P1-201ENST00000432690 571 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 ARPC3P1-201ENST00000437218 533 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 NUTF2P7-201ENST00000453086 375 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC099563.1-201ENST00000456086 418 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC022364.2-201ENST00000457963 554 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 RNU6-420P-201ENST00000458780 107 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC010683.1-201ENST00000473673 378 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC010301.1-201ENST00000473936 355 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC007182.2-201ENST00000489251 402 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 RN7SL323P-201ENST00000494712 295 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC090453.1-201ENST00000495560 436 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC146944.2-203ENST00000502493 354 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC018710.1-201ENST00000506509 158 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 MTND3P22-201ENST00000510932 243 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC139495.1-202ENST00000513164 354 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC018797.3-201ENST00000513388 1241 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms