Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 RNA5SP129-201ENST00000410276 118 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 RN7SKP106-201ENST00000410832 272 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 RAC1P6-201ENST00000423911 575 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 RPL27AP8-201ENST00000424277 446 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 MTCO2P19-201ENST00000427513 598 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 RPL23AP30-201ENST00000432419 501 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC010326.1-201ENST00000462726 602 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 RPL12P20-201ENST00000475538 479 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 RN7SL432P-201ENST00000484057 298 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 RNA5SP468-201ENST00000516782 93 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 RNU6-1092P-201ENST00000516955 87 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AP000827.1-201ENST00000527814 258 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AL355836.1-201ENST00000555951 870 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC007687.1-201ENST00000602704 304 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC012507.3-201ENST00000603556 477 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AL391646.1-201ENST00000603860 190 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AL049634.3-201ENST00000604968 457 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 Z84480.1-201ENST00000605131 311 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 U6atac.1-201ENST00000616025 117 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC006065.6-201ENST00000625201 545 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 EXOC5P1-201ENST00000510543 1969 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 RNU6-960P-201ENST00000364056 120 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 SNORD113.2-201ENST00000364166 89 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 MIR1290-201ENST00000408735 78 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 MTATP6P18-201ENST00000417994 673 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 EIF1P1-201ENST00000421436 341 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AC069157.1-201ENST00000421749 137 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AL360081.1-201ENST00000428299 555 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 RPS20P5-201ENST00000434808 360 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 TXNP1-201ENST00000441872 371 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 MTND2P24-201ENST00000453434 806 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 RPS20P20-201ENST00000460498 340 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 RN7SL826P-201ENST00000479724 288 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AC006517.1-201ENST00000480485 328 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 VN1R105P-201ENST00000486595 910 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 RPS27AP13-201ENST00000498403 237 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 NDUFA5P12-201ENST00000503796 343 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 RN7SKP289-201ENST00000517244 295 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AP001781.1-201ENST00000530977 207 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AP003034.1-201ENST00000534621 422 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 MIR4270-201ENST00000581799 70 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 Z98200.1-201ENST00000607298 470 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AC126118.1-201ENST00000607744 628 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AC017083.3-201ENST00000609955 700 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AL049539.1-201ENST00000611964 459 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 MIR6891-201ENST00000618788 93 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF220Q5VTB9 RPS4XP5-202ENST00000449995 1334 ntBASIC4.09□□□□□ -1.75
RNF220Q5VTB9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.09□□□□□ -1.76
RNF220Q5VTB9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AC106871.1-201ENST00000568324 3102 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 RNU6-1120P-201ENST00000362988 108 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 Y_RNA.159-201ENST00000363674 87 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 RNU2-37P-201ENST00000410695 177 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AL807761.1-201ENST00000417622 171 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 USP9YP9-201ENST00000429406 715 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms