| HES3 | Q5TGS1 | LINC01445-202 | ENST00000458615 | 679 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | MLLT10P2-201 | ENST00000506434 | 249 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC119751.1-201 | ENST00000513357 | 765 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | RNU6-548P-201 | ENST00000517083 | 115 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC104233.2-201 | ENST00000518922 | 414 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AL136146.2-201 | ENST00000534594 | 494 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC018410.2-201 | ENST00000540410 | 610 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC055876.1-202 | ENST00000567053 | 138 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC009163.5-201 | ENST00000575421 | 637 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC010620.2-201 | ENST00000600135 | 313 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC012467.1-201 | ENST00000607740 | 256 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | MIR6076-201 | ENST00000617521 | 113 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | KLRC2-206 | ENST00000619500 | 883 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | C8orf89-202 | ENST00000624510 | 658 nt | APPRIS P2 TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | CUL1P1-201 | ENST00000509510 | 2425 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AP002907.1-201 | ENST00000606361 | 1430 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AGTR1-204 | ENST00000418473 | 2071 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | ATP8A2P3-201 | ENST00000426792 | 1536 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC091564.4-201 | ENST00000533934 | 2194 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | EMCN-202 | ENST00000305864 | 1575 nt | TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | FGF7-201 | ENST00000267843 | 5467 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | XKR3-201 | ENST00000331428 | 1690 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | BCL2A1-202 | ENST00000335661 | 809 nt | TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | MDM4-202 | ENST00000367180 | 547 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | LANCL1-AS1-201 | ENST00000416344 | 714 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | ZRANB2-AS2-204 | ENST00000430605 | 213 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC005160.1-201 | ENST00000432405 | 381 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AL603825.1-201 | ENST00000438481 | 80 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | LINC01802-201 | ENST00000438824 | 523 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | RPS12P2-201 | ENST00000439728 | 269 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AL645638.1-201 | ENST00000440519 | 361 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AL118523.1-201 | ENST00000444436 | 480 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | MTCO3P2-201 | ENST00000457365 | 171 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | snoU109.4-201 | ENST00000458953 | 143 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | MDM2-217 | ENST00000478070 | 692 nt | TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | LEKR1-206 | ENST00000483177 | 546 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | PRELID3BP4-201 | ENST00000515476 | 571 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC104986.1-201 | ENST00000517978 | 436 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC026616.1-201 | ENST00000523157 | 525 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AP000867.2-201 | ENST00000532468 | 320 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | SNRPGP16-201 | ENST00000533275 | 226 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | OR5V1-216 | ENST00000543825 | 1048 nt | APPRIS P1 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AL356804.1-201 | ENST00000553791 | 448 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC090666.1-201 | ENST00000578241 | 445 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | LIVAR-201 | ENST00000578633 | 384 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC055876.5-201 | ENST00000605667 | 259 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | CEP164P1-207 | ENST00000608660 | 504 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC009570.1-201 | ENST00000609599 | 745 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | VN1R9P-201 | ENST00000614184 | 867 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AP006248.3-201 | ENST00000623580 | 594 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AP000676.4-201 | ENST00000624659 | 623 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC110994.2-201 | ENST00000635481 | 492 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC099063.3-201 | ENST00000642066 | 185 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | PRKG2-206 | ENST00000545647 | 3852 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | OR51A7-202 | ENST00000641490 | 2186 nt | APPRIS P1 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | DYNC2H1-202 | ENST00000375735 | 13678 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | UGT2A2-201 | ENST00000604021 | 1544 nt | TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | ANKAR-209 | ENST00000520309 | 4410 nt | APPRIS P1 TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC073130.1-201 | ENST00000457033 | 1958 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | RNU6-619P-201 | ENST00000365146 | 108 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | MRRF-203 | ENST00000373723 | 1176 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | RNU6-1074P-201 | ENST00000383995 | 104 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | TANK-204 | ENST00000403609 | 555 nt | TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | STAT4-203 | ENST00000409995 | 709 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | RNA5SP38-201 | ENST00000410750 | 119 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | ELF3-AS1-201 | ENST00000415582 | 500 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AL035410.1-201 | ENST00000427409 | 427 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AP001117.1-201 | ENST00000428205 | 609 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | MTND2P3-201 | ENST00000452458 | 470 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | TPRKBP1-201 | ENST00000456243 | 481 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | RPL21P18-201 | ENST00000469899 | 480 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | ANKRD7-204 | ENST00000477532 | 744 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | RPL9P6-201 | ENST00000492764 | 598 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | OR4G11P-201 | ENST00000492842 | 939 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | RPL23AP49-201 | ENST00000492925 | 468 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC010468.3-201 | ENST00000508225 | 458 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC008716.1-201 | ENST00000511084 | 513 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | MEPE-206 | ENST00000511670 | 550 nt | TSL 4 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | RNU6-991P-201 | ENST00000516168 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC011586.1-201 | ENST00000521055 | 458 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AP001804.3-201 | ENST00000525146 | 880 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | MRPL51-203 | ENST00000538814 | 501 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC022509.2-201 | ENST00000540392 | 699 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | EEF1B2P4-201 | ENST00000551398 | 348 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC125611.2-201 | ENST00000551907 | 647 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | LINC00557-201 | ENST00000563184 | 1279 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC104365.3-201 | ENST00000587011 | 625 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | LINC01515-204 | ENST00000595269 | 402 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AP000873.2-201 | ENST00000602381 | 406 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC091057.2-201 | ENST00000602594 | 792 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AL359198.2-201 | ENST00000611836 | 194 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC004696.1-201 | ENST00000614345 | 607 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | Metazoa_SRP.117-201 | ENST00000615106 | 292 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AL138880.2-201 | ENST00000616214 | 239 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC026523.1-201 | ENST00000617221 | 490 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AL136981.2-201 | ENST00000617319 | 734 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC009318.4-201 | ENST00000620496 | 486 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | MIR1291-201 | ENST00000627649 | 87 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| HES3 | Q5TGS1 | AC111188.2-201 | ENST00000529697 | 1387 nt | BASIC | 2.3 | □□□□□ -2.04 | | |