Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC011460.1-201ENST00000636268 1834 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 OR5J1P-201ENST00000313544 939 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 RNY4P16-201ENST00000364768 94 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AL590002.1-201ENST00000406554 418 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 MIR1183-201ENST00000408856 89 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC009237.5-201ENST00000414271 501 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC233728.2-201ENST00000425348 757 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 YME1L1P1-201ENST00000429435 297 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 RPL31P35-201ENST00000431058 377 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC000111.3-201ENST00000433478 193 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 MTND4LP10-201ENST00000435146 291 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 PPIAP3-201ENST00000450588 505 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC092001.1-201ENST00000453012 261 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 MTCO3P20-201ENST00000454926 688 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC013267.1-201ENST00000458227 267 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 SNORD121B-201ENST00000458838 81 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 ST13P14-201ENST00000474095 734 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AL139099.1-201ENST00000497398 403 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC117522.1-201ENST00000509821 380 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 Y_RNA.702-201ENST00000516843 96 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 MTCO2P4-201ENST00000517968 247 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 IGKV2-23-201ENST00000518729 323 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AP001646.1-201ENST00000527936 915 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 MIR3118-1-201ENST00000581787 76 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC010680.3-201ENST00000604215 520 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC110741.2-201ENST00000605278 268 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC069200.1-201ENST00000609511 323 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC063943.3-201ENST00000615562 356 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC006338.1-201ENST00000618453 749 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC233309.1-201ENST00000619522 751 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC002550.2-201ENST00000621246 394 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC009268.2-201ENST00000621925 457 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AP003400.5-201ENST00000624827 617 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AL159972.1-201ENST00000625150 448 ntBASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A4Q53GD3 AC009902.3-201ENST00000606235 2172 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC024560.2-201ENST00000507981 1497 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 MTND4P29-201ENST00000503122 1372 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 Y_RNA.450-201ENST00000384198 113 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 Y_RNA.453-201ENST00000384223 109 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 MIR124-3-201ENST00000384866 87 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AL138878.1-201ENST00000405131 347 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC069157.1-201ENST00000421749 137 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 OR4K11P-201ENST00000431829 904 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 ARPC3P1-201ENST00000437218 533 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC098614.3-201ENST00000438957 440 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 RABEPKP1-201ENST00000440529 1026 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC079448.1-201ENST00000449377 373 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 FABP3P2-201ENST00000453169 399 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 RNA5SP246-201ENST00000458909 119 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 snoU109.4-201ENST00000458953 143 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AF213884.1-201ENST00000488102 463 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms