Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 AMZ2P1-203ENST00000565833 850 ntBASIC4.01□□□□□ -1.77
C4orf46Q504U0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.01□□□□□ -1.77
C4orf46Q504U0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
C4orf46Q504U0 AC005730.3-201ENST00000583067 366 ntBASIC4.01□□□□□ -1.77
C4orf46Q504U0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.01□□□□□ -1.77
C4orf46Q504U0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.01□□□□□ -1.77
C4orf46Q504U0 AC008966.2-201ENST00000606157 453 ntBASIC4.01□□□□□ -1.77
C4orf46Q504U0 AC104458.1-201ENST00000608243 463 ntBASIC4.01□□□□□ -1.77
C4orf46Q504U0 AC099778.2-201ENST00000610904 211 ntBASIC4.01□□□□□ -1.77
C4orf46Q504U0 AC002553.4-201ENST00000616896 331 ntBASIC4.01□□□□□ -1.77
C4orf46Q504U0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.01□□□□□ -1.77
C4orf46Q504U0 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.01□□□□□ -1.77
C4orf46Q504U0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.01□□□□□ -1.77
C4orf46Q504U0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
C4orf46Q504U0 CASC19-280ENST00000642102 1351 ntBASIC4.01□□□□□ -1.77
C4orf46Q504U0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
C4orf46Q504U0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4□□□□□ -1.77
C4orf46Q504U0 SNORA72.1-201ENST00000363485 129 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 RNA5SP234-201ENST00000363916 119 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4□□□□□ -1.77
C4orf46Q504U0 CD24P4-201ENST00000382840 243 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 RNU6-198P-201ENST00000384258 104 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 RNU1-77P-201ENST00000390868 162 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 RPL23AP32-201ENST00000395315 459 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4□□□□□ -1.77
C4orf46Q504U0 RNU2-9P-201ENST00000410194 145 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 RNU2-33P-201ENST00000410344 192 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4□□□□□ -1.77
C4orf46Q504U0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4□□□□□ -1.77
C4orf46Q504U0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4□□□□□ -1.77
C4orf46Q504U0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4□□□□□ -1.77
C4orf46Q504U0 RPS15AP9-201ENST00000439856 381 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AL049734.2-201ENST00000441066 616 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 PIGFP3-201ENST00000441918 722 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 SNRPEP8-201ENST00000442866 260 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4□□□□□ -1.77
C4orf46Q504U0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4□□□□□ -1.77
C4orf46Q504U0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4□□□□□ -1.77
C4orf46Q504U0 GAPDHP27-201ENST00000447427 1020 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 RN7SL168P-201ENST00000463821 279 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AC055855.1-201ENST00000489563 579 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4□□□□□ -1.77
C4orf46Q504U0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4□□□□□ -1.77
C4orf46Q504U0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4□□□□□ -1.77
C4orf46Q504U0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4□□□□□ -1.77
C4orf46Q504U0 RNA5SP154-201ENST00000516193 111 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4□□□□□ -1.77
C4orf46Q504U0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4□□□□□ -1.77
C4orf46Q504U0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4□□□□□ -1.77
C4orf46Q504U0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4□□□□□ -1.77
C4orf46Q504U0 AC015912.2-201ENST00000571053 181 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4□□□□□ -1.77
C4orf46Q504U0 NRBF2P1-201ENST00000587407 859 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4□□□□□ -1.77
C4orf46Q504U0 AC012507.3-201ENST00000603556 477 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 NUTF2P8-201ENST00000604593 363 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 SNHG22-203ENST00000617833 660 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AC092794.2-201ENST00000620933 563 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AL445363.3-201ENST00000623080 671 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 AC022140.2-201ENST00000623500 188 ntBASIC4□□□□□ -1.77
C4orf46Q504U0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4□□□□□ -1.77
C4orf46Q504U0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4□□□□□ -1.77
C4orf46Q504U0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
C4orf46Q504U0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
C4orf46Q504U0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
C4orf46Q504U0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4□□□□□ -1.77
C4orf46Q504U0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
C4orf46Q504U0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4□□□□□ -1.77
C4orf46Q504U0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
C4orf46Q504U0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
C4orf46Q504U0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
C4orf46Q504U0 AC116667.1-201ENST00000604855 2072 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
C4orf46Q504U0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.99□□□□□ -1.77
C4orf46Q504U0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
C4orf46Q504U0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
C4orf46Q504U0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
C4orf46Q504U0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
C4orf46Q504U0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
C4orf46Q504U0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
C4orf46Q504U0 Y_RNA.89-201ENST00000363031 102 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 RNU6-1085P-201ENST00000363576 107 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 Y_RNA.159-201ENST00000363674 87 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
C4orf46Q504U0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
C4orf46Q504U0 AL357515.1-201ENST00000402967 542 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.99□□□□□ -1.77
C4orf46Q504U0 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 MTND3P17-201ENST00000416968 344 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 ZNF863P-201ENST00000426746 417 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
C4orf46Q504U0 AC000111.3-201ENST00000433478 193 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 CYCSP6-201ENST00000434498 302 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 RPL7P54-201ENST00000438336 674 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 HMGB3P11-201ENST00000440127 604 ntBASIC3.99□□□□□ -1.77
C4orf46Q504U0 AL390119.1-201ENST00000440329 312 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms