Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC092954.1-201ENST00000609121 445 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AP001486.3-201ENST00000615334 372 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 ZNF833P-201ENST00000424938 1494 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AL513185.3-201ENST00000433335 1300 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 RNU6-7-201ENST00000364784 107 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 RNU6-8-201ENST00000365467 107 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AC107081.1-201ENST00000414975 361 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 NUP35P1-201ENST00000422734 947 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 EZH2P1-201ENST00000431167 291 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AL392003.1-201ENST00000434394 243 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 XKRY2-201ENST00000442362 1093 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AC092155.2-201ENST00000454675 477 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AC087588.1-201ENST00000462203 316 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 RPS3AP14-201ENST00000483907 780 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 RPL23AP41-201ENST00000484754 458 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AC104687.1-201ENST00000485829 412 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 RNA5SP148-201ENST00000516527 94 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AC018630.1-201ENST00000541376 925 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 MIR4319-201ENST00000577285 85 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AP004372.1-201ENST00000604842 844 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AL161423.1-201ENST00000613700 262 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 CTSLP2-204ENST00000629029 392 ntBASIC1.93□□□□□ -2.1
CCDC58Q4VC31 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC58Q4VC31 RNU6-989P-201ENST00000362756 107 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 SNORD46.1-201ENST00000364139 104 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 SEPT2P1-201ENST00000419651 180 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 RPL23AP83-201ENST00000434984 473 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 NDUFB4P6-201ENST00000436819 366 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 YWHAZP8-201ENST00000436935 731 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 AL021397.1-201ENST00000451806 248 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 RN7SL432P-201ENST00000484057 298 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 RN7SL636P-201ENST00000497504 294 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 MRPS36P2-201ENST00000512569 299 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
CCDC58Q4VC31 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC58Q4VC31 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC58Q4VC31 MTND4P8-201ENST00000514997 1362 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 RNU6-1074P-201ENST00000383995 104 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 RNU6-761P-201ENST00000384148 107 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 DSTNP4-201ENST00000399472 474 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 AC092017.2-201ENST00000427600 362 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC58Q4VC31 RPL35AP22-201ENST00000436855 335 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.91□□□□□ -2.1
CCDC58Q4VC31 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC58Q4VC31 AL109933.2-201ENST00000452651 260 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 AC105252.1-201ENST00000503089 286 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC58Q4VC31 LRRC37A5P-203ENST00000580181 585 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 AC135507.2-201ENST00000612443 309 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 AC004852.3-201ENST00000614131 326 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 AL449363.1-201ENST00000617815 186 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 AC027309.3-201ENST00000623419 351 ntBASIC1.91□□□□□ -2.1
CCDC58Q4VC31 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC58Q4VC31 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CCDC58Q4VC31 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
CCDC58Q4VC31 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms