Protein–RNA interactions for Protein: Q16518

RPE65, Retinoid isomerohydrolase, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPE65Q16518 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPE65Q16518 Y_RNA.3-201ENST00000362331 103 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 RNU5A-8P-201ENST00000364102 114 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 RNA5SP235-201ENST00000365411 114 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
RPE65Q16518 RNU6-259P-201ENST00000383999 107 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 RNU6-637P-201ENST00000384050 107 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 RNU6-432P-201ENST00000384196 109 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 RNU6ATAC-201ENST00000408749 126 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
RPE65Q16518 EI24P1-201ENST00000416584 867 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RPE65Q16518 AL591419.1-201ENST00000427423 339 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AC104651.1-201ENST00000427559 735 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.72□□□□□ -1.81
RPE65Q16518 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.72□□□□□ -1.81
RPE65Q16518 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.72□□□□□ -1.81
RPE65Q16518 AC009961.2-201ENST00000435771 251 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 RPL35AP22-201ENST00000436855 335 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.72□□□□□ -1.81
RPE65Q16518 NANOGP10-201ENST00000453325 895 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AC108059.3-201ENST00000456388 214 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.72□□□□□ -1.81
RPE65Q16518 TMED11P-201ENST00000479478 690 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 RPL7P23-201ENST00000493874 747 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.72□□□□□ -1.81
RPE65Q16518 MTND2P33-201ENST00000506452 1031 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 RNA5SP164-201ENST00000516533 110 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.72□□□□□ -1.81
RPE65Q16518 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.72□□□□□ -1.81
RPE65Q16518 AL133271.1-201ENST00000538229 291 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.72□□□□□ -1.81
RPE65Q16518 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.72□□□□□ -1.81
RPE65Q16518 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.72□□□□□ -1.81
RPE65Q16518 EIF1P4-201ENST00000572664 335 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 MIR3146-201ENST00000580367 79 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.72□□□□□ -1.81
RPE65Q16518 AC108747.1-201ENST00000609508 535 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AC091304.9-201ENST00000612091 226 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.72□□□□□ -1.81
RPE65Q16518 uc_338.32-201ENST00000615087 172 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.72□□□□□ -1.81
RPE65Q16518 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.72□□□□□ -1.81
RPE65Q16518 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPE65Q16518 AC004925.1-201ENST00000624256 2706 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 AC024560.2-201ENST00000507981 1497 ntBASIC3.72□□□□□ -1.81
RPE65Q16518 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPE65Q16518 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.72□□□□□ -1.81
RPE65Q16518 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.81
RPE65Q16518 AL157700.1-201ENST00000561973 1432 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.71□□□□□ -1.82
RPE65Q16518 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.71□□□□□ -1.82
RPE65Q16518 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.71□□□□□ -1.82
RPE65Q16518 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPE65Q16518 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RPE65Q16518 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RPE65Q16518 RNY4P16-201ENST00000364768 94 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 RNU6-1074P-201ENST00000383995 104 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 U8.11-201ENST00000384699 133 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 U8.12-201ENST00000384701 133 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 MIR19A-201ENST00000384878 82 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 RNU6-278P-201ENST00000390945 109 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 Y_RNA.619-201ENST00000410951 90 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 RNU6-195P-201ENST00000411352 109 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.71□□□□□ -1.82
RPE65Q16518 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.71□□□□□ -1.82
RPE65Q16518 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.71□□□□□ -1.82
RPE65Q16518 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.71□□□□□ -1.82
RPE65Q16518 AC087650.1-201ENST00000431445 468 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 RPL7P28-201ENST00000437739 740 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 USP9YP15-201ENST00000442391 422 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.71□□□□□ -1.82
RPE65Q16518 NOTCH2P1-201ENST00000443481 624 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 NPM1P49-201ENST00000448027 714 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 AL500522.2-201ENST00000448562 343 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 HMGB3P22-202ENST00000451823 572 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.71□□□□□ -1.82
RPE65Q16518 AC007967.1-201ENST00000455422 1159 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.71□□□□□ -1.82
RPE65Q16518 RNU7-59P-201ENST00000459101 61 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 SNORA84-201ENST00000459229 133 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 U8.18-201ENST00000459285 133 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 RPS3AP17-201ENST00000472594 777 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RPE65Q16518 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.71□□□□□ -1.82
RPE65Q16518 MTCO2P4-201ENST00000517968 247 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.71□□□□□ -1.82
RPE65Q16518 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.71□□□□□ -1.82
RPE65Q16518 OR4T1P-201ENST00000554933 911 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.71□□□□□ -1.82
RPE65Q16518 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.71□□□□□ -1.82
RPE65Q16518 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.71□□□□□ -1.82
RPE65Q16518 AC087481.2-201ENST00000565492 330 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 AC012182.1-201ENST00000570133 895 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 MIR1254-2-201ENST00000579553 63 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.71□□□□□ -1.82
RPE65Q16518 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.71□□□□□ -1.82
RPE65Q16518 KC877982.1-201ENST00000602313 470 ntBASIC3.71□□□□□ -1.82
RPE65Q16518 AP001429.1-201ENST00000602568 530 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms