Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCH1Q13635 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCH1Q13635 AL109620.1-201ENST00000618738 1197 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCH1Q13635 MIR6733-201ENST00000635723 61 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCH1Q13635 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCH1Q13635 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
PTCH1Q13635 AL512283.1-201ENST00000606756 1384 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.39□□□□□ -1.87
PTCH1Q13635 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PTCH1Q13635 RNU6-989P-201ENST00000362756 107 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 Y_RNA.164-201ENST00000363709 102 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 OR1L1-202ENST00000373686 1083 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 RNU6-549P-201ENST00000384433 107 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AL133384.1-201ENST00000412744 351 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 FNDC3CP-201ENST00000420795 1155 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AL390023.1-201ENST00000428836 262 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCH1Q13635 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCH1Q13635 RNU7-140P-201ENST00000459546 60 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AC092754.2-201ENST00000463506 460 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AL049830.2-201ENST00000480072 201 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCH1Q13635 MTCO2P9-201ENST00000503214 694 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCH1Q13635 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.39□□□□□ -1.87
PTCH1Q13635 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCH1Q13635 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.39□□□□□ -1.87
PTCH1Q13635 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.39□□□□□ -1.87
PTCH1Q13635 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCH1Q13635 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.39□□□□□ -1.87
PTCH1Q13635 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTCH1Q13635 AP003049.1-201ENST00000529418 457 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AC123904.3-201ENST00000547218 814 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCH1Q13635 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCH1Q13635 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCH1Q13635 MIR5092-201ENST00000583139 88 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 SNORD39.3-201ENST00000584451 71 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AP001029.3-201ENST00000588063 596 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCH1Q13635 VN1R74P-201ENST00000613259 503 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AL136981.2-201ENST00000617319 734 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AP000720.1-201ENST00000625091 483 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 AL121594.5-201ENST00000631724 573 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCH1Q13635 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCH1Q13635 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCH1Q13635 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTCH1Q13635 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.39□□□□□ -1.87
PTCH1Q13635 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.39□□□□□ -1.87
PTCH1Q13635 RNU6-730P-201ENST00000383954 104 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 RNU4-65P-201ENST00000410473 140 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 TAF13P2-201ENST00000416876 286 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.38□□□□□ -1.87
PTCH1Q13635 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.38□□□□□ -1.87
PTCH1Q13635 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.38□□□□□ -1.87
PTCH1Q13635 MTCO3P2-201ENST00000457365 171 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PTCH1Q13635 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCH1Q13635 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.38□□□□□ -1.87
PTCH1Q13635 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PTCH1Q13635 RNA5SP281-201ENST00000516504 135 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 ARL2BPP5-201ENST00000523141 481 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.38□□□□□ -1.87
PTCH1Q13635 AC018630.1-201ENST00000541376 925 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.38□□□□□ -1.87
PTCH1Q13635 TMF1P1-201ENST00000576058 373 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 SNORD84-203ENST00000584275 78 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PTCH1Q13635 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.38□□□□□ -1.87
PTCH1Q13635 XIAPP1-201ENST00000603162 600 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 AC002487.1-201ENST00000604565 994 ntBASIC3.38□□□□□ -1.87
PTCH1Q13635 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.38□□□□□ -1.87
PTCH1Q13635 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.38□□□□□ -1.87
PTCH1Q13635 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.38□□□□□ -1.87
PTCH1Q13635 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PTCH1Q13635 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PTCH1Q13635 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.37□□□□□ -1.87
PTCH1Q13635 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.37□□□□□ -1.87
PTCH1Q13635 RPL23AP74-201ENST00000437246 471 ntBASIC3.37□□□□□ -1.87
PTCH1Q13635 AL158053.1-201ENST00000441503 453 ntBASIC3.37□□□□□ -1.87
PTCH1Q13635 RPS20P24-201ENST00000457473 361 ntBASIC3.37□□□□□ -1.87
PTCH1Q13635 RPL9P6-201ENST00000492764 598 ntBASIC3.37□□□□□ -1.87
PTCH1Q13635 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.37□□□□□ -1.87
PTCH1Q13635 AC008628.1-201ENST00000508663 265 ntBASIC3.37□□□□□ -1.87
PTCH1Q13635 AC006518.2-201ENST00000542513 940 ntBASIC3.37□□□□□ -1.87
PTCH1Q13635 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.37□□□□□ -1.87
PTCH1Q13635 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCH1Q13635 AP000942.3-201ENST00000603702 160 ntBASIC3.37□□□□□ -1.87
PTCH1Q13635 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCH1Q13635 AP005229.2-201ENST00000609980 697 ntBASIC3.37□□□□□ -1.87
PTCH1Q13635 VIS1.1-201ENST00000610517 203 ntBASIC3.37□□□□□ -1.87
PTCH1Q13635 AC104237.2-201ENST00000612456 443 ntBASIC3.37□□□□□ -1.87
PTCH1Q13635 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PTCH1Q13635 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.37□□□□□ -1.87
PTCH1Q13635 AC022336.2-201ENST00000568966 2538 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms