Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.51□□□□□ -2.17
TFF3Q07654 RNU7-95P-201ENST00000459222 64 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 RPS23P3-201ENST00000470993 430 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.51□□□□□ -2.17
TFF3Q07654 MTCO2P9-201ENST00000503214 694 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.51□□□□□ -2.17
TFF3Q07654 AC010546.1-201ENST00000569391 485 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.51□□□□□ -2.17
TFF3Q07654 KATNBL1P1-201ENST00000605192 748 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 GMCL1P2-201ENST00000605230 823 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.51□□□□□ -2.17
TFF3Q07654 AL158801.5-201ENST00000623123 465 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 AP000676.4-201ENST00000624659 623 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
TFF3Q07654 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TFF3Q07654 SNORA16.1-201ENST00000364597 132 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.5□□□□□ -2.17
TFF3Q07654 MIR499A-201ENST00000384903 122 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 RNU1-101P-201ENST00000391171 127 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 RNU2-40P-201ENST00000410833 196 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 AC092473.1-201ENST00000441098 221 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 SSXP1-201ENST00000453640 473 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 RPS29P20-201ENST00000489592 171 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 AC090453.1-201ENST00000495560 436 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC1.5□□□□□ -2.17
TFF3Q07654 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
TFF3Q07654 CBX3P4-201ENST00000538909 354 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.5□□□□□ -2.17
TFF3Q07654 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.5□□□□□ -2.17
TFF3Q07654 AC013444.2-201ENST00000603317 787 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 AC019159.1-201ENST00000605094 187 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 AC140725.3-201ENST00000616193 880 ntBASIC1.5□□□□□ -2.17
TFF3Q07654 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC1.49□□□□□ -2.17
TFF3Q07654 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.49□□□□□ -2.17
TFF3Q07654 HMGB1P10-201ENST00000395823 563 ntBASIC1.49□□□□□ -2.17
TFF3Q07654 RNU2-17P-201ENST00000410290 190 ntBASIC1.49□□□□□ -2.17
TFF3Q07654 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.49□□□□□ -2.17
TFF3Q07654 RPL23AP58-201ENST00000440453 469 ntBASIC1.49□□□□□ -2.17
TFF3Q07654 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.49□□□□□ -2.17
TFF3Q07654 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.49□□□□□ -2.17
TFF3Q07654 PPP1R2P5-201ENST00000457256 603 ntBASIC1.49□□□□□ -2.17
TFF3Q07654 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.49□□□□□ -2.17
TFF3Q07654 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.49□□□□□ -2.17
TFF3Q07654 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.49□□□□□ -2.17
TFF3Q07654 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.49□□□□□ -2.17
TFF3Q07654 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TFF3Q07654 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.49□□□□□ -2.17
TFF3Q07654 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TFF3Q07654 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.49□□□□□ -2.17
TFF3Q07654 AC090953.1-201ENST00000604305 1092 ntBASIC1.49□□□□□ -2.17
TFF3Q07654 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.49□□□□□ -2.17
TFF3Q07654 AC079597.1-201ENST00000624306 508 ntBASIC1.49□□□□□ -2.17
TFF3Q07654 PABPC1P7-201ENST00000413177 1513 ntBASIC1.49□□□□□ -2.17
TFF3Q07654 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
TFF3Q07654 CENPCP1-201ENST00000533085 2578 ntBASIC1.49□□□□□ -2.17
TFF3Q07654 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
TFF3Q07654 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.48□□□□□ -2.17
TFF3Q07654 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
TFF3Q07654 RPL31P2-201ENST00000413849 377 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 AC009414.1-201ENST00000427200 443 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 HMGB1P31-201ENST00000437242 427 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.48□□□□□ -2.17
TFF3Q07654 XKRY2-201ENST00000442362 1093 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 TAF9P1-201ENST00000445421 515 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 HMGN2P21-201ENST00000447764 270 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.48□□□□□ -2.17
TFF3Q07654 TAF9P2-201ENST00000454958 515 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 RPL23AP41-201ENST00000484754 458 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 MTCYBP17-201ENST00000503579 789 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 HMGB3P3-201ENST00000510526 400 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.48□□□□□ -2.17
TFF3Q07654 AC087808.1-201ENST00000520501 361 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 AC012493.3-201ENST00000604494 112 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 AL512598.1-201ENST00000610158 273 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.48□□□□□ -2.17
TFF3Q07654 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TFF3Q07654 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
TFF3Q07654 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TFF3Q07654 RNA5SP27-201ENST00000363839 119 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.47□□□□□ -2.17
TFF3Q07654 ELOCP10-201ENST00000440624 327 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 RPL21P104-201ENST00000464143 478 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.47□□□□□ -2.17
TFF3Q07654 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TFF3Q07654 AC109464.2-201ENST00000510242 943 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 RPPH1-2P-201ENST00000516688 293 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 RN7SKP96-201ENST00000516948 297 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 OR4V1P-201ENST00000525394 1140 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 OR5AQ1P-201ENST00000527596 927 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 SYF2P1-201ENST00000550658 413 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 AL161713.1-201ENST00000555538 145 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.47□□□□□ -2.17
TFF3Q07654 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.47□□□□□ -2.17
TFF3Q07654 MIR4419B-201ENST00000577260 68 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 AC024614.2-201ENST00000577584 372 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.47□□□□□ -2.17
TFF3Q07654 ELOCP34-201ENST00000604436 327 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 AC090897.3-201ENST00000636973 1157 ntBASIC1.47□□□□□ -2.17
TFF3Q07654 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms