Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AL591416.1-201ENST00000404015 867 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 RNU4-6P-201ENST00000410804 122 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.81□□□□□ -1.64
HERVK_113P62684 RWDD4P2-201ENST00000426392 563 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.81□□□□□ -1.64
HERVK_113P62684 MTCO2P29-201ENST00000465212 189 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.81□□□□□ -1.64
HERVK_113P62684 AC021382.1-201ENST00000483523 359 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 AC104164.2-201ENST00000496953 495 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 Y_RNA.675-201ENST00000516389 149 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 RNA5SP360-201ENST00000516555 118 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 RNU6-835P-201ENST00000516974 104 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 IGLVIV-53-201ENST00000520107 367 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.81□□□□□ -1.64
HERVK_113P62684 PHBP17-201ENST00000528576 541 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 SETP2-201ENST00000553886 926 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.81□□□□□ -1.64
HERVK_113P62684 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.81□□□□□ -1.64
HERVK_113P62684 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.81□□□□□ -1.64
HERVK_113P62684 AC015917.1-201ENST00000579654 510 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 AC024220.1-201ENST00000603675 484 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 AC115621.1-201ENST00000604653 858 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.81□□□□□ -1.64
HERVK_113P62684 AC015813.4-201ENST00000610469 179 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.81□□□□□ -1.64
HERVK_113P62684 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HERVK_113P62684 AL356585.4-201ENST00000623078 1229 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.81□□□□□ -1.64
HERVK_113P62684 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.81□□□□□ -1.64
HERVK_113P62684 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HERVK_113P62684 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.81□□□□□ -1.64
HERVK_113P62684 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HERVK_113P62684 ZNF680P1-201ENST00000436625 1469 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HERVK_113P62684 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HERVK_113P62684 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HERVK_113P62684 AC016588.2-201ENST00000632484 3021 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 RNU1-15P-201ENST00000353977 144 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 RNU4-73P-201ENST00000363164 141 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 Y_RNA.142-201ENST00000363491 102 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 RNU6-1097P-201ENST00000363586 107 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 Y_RNA.529-201ENST00000384586 119 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 Y_RNA.535-201ENST00000384612 99 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 MIR1-2-201ENST00000384961 85 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 MIR513A2-201ENST00000385249 127 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 SNORD66.1-201ENST00000391230 76 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HERVK_113P62684 RPL7P60-201ENST00000397636 735 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 RNA5SP118-201ENST00000410385 109 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 RNU6-1068P-201ENST00000410958 103 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 AC004987.3-201ENST00000413879 771 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 AC137499.1-201ENST00000427602 88 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 OR4F13P-201ENST00000428478 931 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 ATP5JP1-201ENST00000431631 322 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HERVK_113P62684 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.8□□□□□ -1.64
HERVK_113P62684 AC016691.1-201ENST00000441321 413 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HERVK_113P62684 AL133547.1-201ENST00000448546 220 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.8□□□□□ -1.64
HERVK_113P62684 RNU6-261P-201ENST00000459506 102 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.8□□□□□ -1.64
HERVK_113P62684 RPL39P36-201ENST00000490784 156 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.8□□□□□ -1.64
HERVK_113P62684 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.8□□□□□ -1.64
HERVK_113P62684 AC090572.1-201ENST00000519251 160 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.8□□□□□ -1.64
HERVK_113P62684 AC068446.3-201ENST00000555285 382 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.8□□□□□ -1.64
HERVK_113P62684 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.8□□□□□ -1.64
HERVK_113P62684 YWHAQP7-201ENST00000603536 658 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 AL031666.3-201ENST00000609320 1006 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 DISC2.1-201ENST00000612827 205 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.8□□□□□ -1.64
HERVK_113P62684 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 CR392039.5-201ENST00000623201 510 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 MTND1P37-201ENST00000636562 264 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HERVK_113P62684 AC116667.1-201ENST00000604855 2072 ntBASIC4.8□□□□□ -1.64
HERVK_113P62684 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HERVK_113P62684 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HERVK_113P62684 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
HERVK_113P62684 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HERVK_113P62684 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HERVK_113P62684 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HERVK_113P62684 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.79□□□□□ -1.64
HERVK_113P62684 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.79□□□□□ -1.64
HERVK_113P62684 NOL8P1-201ENST00000508336 3529 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERVK_113P62684 RPS4XP5-202ENST00000449995 1334 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERVK_113P62684 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HERVK_113P62684 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HERVK_113P62684 NACAP2-201ENST00000318548 624 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 Y_RNA.72-201ENST00000362894 103 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 RNU4-76P-201ENST00000364509 141 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 RNU6-108P-201ENST00000365558 107 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.79□□□□□ -1.64
HERVK_113P62684 RNU6-767P-201ENST00000384132 107 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms