Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 DUXAP9-208ENST00000622815 614 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC243312.2-201ENST00000623340 601 ntBASIC3.05□□□□□ -1.92
LMO4P61968 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 AC231657.1-201ENST00000624313 397 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC124864.2-201ENST00000624736 186 ntBASIC3.05□□□□□ -1.92
LMO4P61968 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 AP000553.6-201ENST00000641242 118 ntBASIC3.05□□□□□ -1.92
LMO4P61968 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LMO4P61968 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LMO4P61968 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LMO4P61968 AC007823.1-201ENST00000569932 1566 ntBASIC3.04□□□□□ -1.92
LMO4P61968 MTCO1P12-201ENST00000414273 1543 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AL157700.1-201ENST00000561973 1432 ntBASIC3.04□□□□□ -1.92
LMO4P61968 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LMO4P61968 SNORA72.1-201ENST00000363485 129 ntBASIC3.04□□□□□ -1.92
LMO4P61968 RNU6-335P-201ENST00000364563 113 ntBASIC3.04□□□□□ -1.92
LMO4P61968 RNA5SP189-201ENST00000364920 115 ntBASIC3.04□□□□□ -1.92
LMO4P61968 SNORD82-201ENST00000365530 70 ntBASIC3.04□□□□□ -1.92
LMO4P61968 Y_RNA.372-201ENST00000365599 102 ntBASIC3.04□□□□□ -1.92
LMO4P61968 RNU6-761P-201ENST00000384148 107 ntBASIC3.04□□□□□ -1.92
LMO4P61968 RPS3AP36-201ENST00000398190 775 ntBASIC3.04□□□□□ -1.92
LMO4P61968 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LMO4P61968 CCNG1P1-201ENST00000406783 885 ntBASIC3.04□□□□□ -1.92
LMO4P61968 RPL23AP48-201ENST00000406913 488 ntBASIC3.04□□□□□ -1.92
LMO4P61968 RNA5SP56-201ENST00000410277 118 ntBASIC3.04□□□□□ -1.92
LMO4P61968 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO4P61968 AC244098.2-201ENST00000422068 99 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.04□□□□□ -1.92
LMO4P61968 AL513174.1-201ENST00000423182 629 ntBASIC3.04□□□□□ -1.92
LMO4P61968 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO4P61968 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.04□□□□□ -1.92
LMO4P61968 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AL159987.2-201ENST00000432754 307 ntBASIC3.04□□□□□ -1.92
LMO4P61968 RPL21P112-201ENST00000434403 463 ntBASIC3.04□□□□□ -1.92
LMO4P61968 RPL37P21-201ENST00000435890 276 ntBASIC3.04□□□□□ -1.92
LMO4P61968 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC092427.1-201ENST00000439177 601 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC112653.1-201ENST00000443851 386 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO4P61968 RPL39P6-201ENST00000448289 150 ntBASIC3.04□□□□□ -1.92
LMO4P61968 MTND5P20-201ENST00000448677 143 ntBASIC3.04□□□□□ -1.92
LMO4P61968 PSPHP1-201ENST00000450062 261 ntBASIC3.04□□□□□ -1.92
LMO4P61968 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO4P61968 AC133473.1-201ENST00000455173 299 ntBASIC3.04□□□□□ -1.92
LMO4P61968 snoU109.1-201ENST00000459339 135 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC097493.1-201ENST00000463958 372 ntBASIC3.04□□□□□ -1.92
LMO4P61968 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.04□□□□□ -1.92
LMO4P61968 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO4P61968 AC069439.1-201ENST00000494739 167 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC114981.1-201ENST00000503897 678 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC093767.1-201ENST00000504523 156 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC021678.1-201ENST00000505195 936 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO4P61968 NDUFB4P2-201ENST00000509515 391 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC006499.2-201ENST00000513470 337 ntBASIC3.04□□□□□ -1.92
LMO4P61968 RNU6-150P-201ENST00000516237 95 ntBASIC3.04□□□□□ -1.92
LMO4P61968 RNU2-58P-201ENST00000516403 183 ntBASIC3.04□□□□□ -1.92
LMO4P61968 SNORA18.6-201ENST00000516792 115 ntBASIC3.04□□□□□ -1.92
LMO4P61968 Y_RNA.702-201ENST00000516843 96 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO4P61968 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.04□□□□□ -1.92
LMO4P61968 AC013828.2-201ENST00000532487 235 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.04□□□□□ -1.92
LMO4P61968 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.04□□□□□ -1.92
LMO4P61968 AC090502.2-201ENST00000549267 280 ntBASIC3.04□□□□□ -1.92
LMO4P61968 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.04□□□□□ -1.92
LMO4P61968 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.04□□□□□ -1.92
LMO4P61968 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.04□□□□□ -1.92
LMO4P61968 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO4P61968 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.04□□□□□ -1.92
LMO4P61968 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO4P61968 BNIP3P23-201ENST00000599655 511 ntBASIC3.04□□□□□ -1.92
LMO4P61968 SNRPGP15-201ENST00000600149 222 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC112191.3-201ENST00000604371 277 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC090578.1-201ENST00000604955 591 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC007179.3-201ENST00000604976 235 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC091965.4-201ENST00000607691 587 ntBASIC3.04□□□□□ -1.92
LMO4P61968 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.04□□□□□ -1.92
LMO4P61968 AP001506.1-201ENST00000615444 211 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AC006338.1-201ENST00000618453 749 ntBASIC3.04□□□□□ -1.92
LMO4P61968 MIR7975-201ENST00000619350 68 ntBASIC3.04□□□□□ -1.92
LMO4P61968 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.04□□□□□ -1.92
LMO4P61968 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.04□□□□□ -1.92
LMO4P61968 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LMO4P61968 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.04□□□□□ -1.92
LMO4P61968 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LMO4P61968 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LMO4P61968 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LMO4P61968 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LMO4P61968 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms