Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SRGNP1-201ENST00000603392 451 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 YPEL5P2-201ENST00000605553 359 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 AC055876.5-201ENST00000605667 259 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 MIR6075-201ENST00000620782 95 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 AC073308.1-201ENST00000623696 305 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.7□□□□□ -2.14
CKS1BP61024 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CKS1BP61024 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CKS1BP61024 MTND4P27-201ENST00000450813 1354 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.69□□□□□ -2.14
CKS1BP61024 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CKS1BP61024 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.69□□□□□ -2.14
CKS1BP61024 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CKS1BP61024 RNA5SP138-201ENST00000365098 114 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 MIR9-1-201ENST00000385198 89 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 RNU6-220P-201ENST00000390919 107 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 GSTA9P-201ENST00000406231 611 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.69□□□□□ -2.14
CKS1BP61024 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.69□□□□□ -2.14
CKS1BP61024 KLF3P2-201ENST00000465138 268 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.69□□□□□ -2.14
CKS1BP61024 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.69□□□□□ -2.14
CKS1BP61024 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.69□□□□□ -2.14
CKS1BP61024 HIGD1AP13-201ENST00000509878 289 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 TTC39CP1-201ENST00000512513 755 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.69□□□□□ -2.14
CKS1BP61024 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.69□□□□□ -2.14
CKS1BP61024 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.69□□□□□ -2.14
CKS1BP61024 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.69□□□□□ -2.14
CKS1BP61024 CCNG2P1-201ENST00000549521 1000 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.69□□□□□ -2.14
CKS1BP61024 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.69□□□□□ -2.14
CKS1BP61024 AC079791.1-201ENST00000605356 973 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 U4.3-201ENST00000621047 82 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.69□□□□□ -2.14
CKS1BP61024 AC009950.2-201ENST00000636548 183 ntBASIC1.69□□□□□ -2.14
CKS1BP61024 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.69□□□□□ -2.14
CKS1BP61024 AC011477.1-204ENST00000623416 1325 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.68□□□□□ -2.14
CKS1BP61024 RNU1-112P-201ENST00000364401 164 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.68□□□□□ -2.14
CKS1BP61024 SNORA18.3-201ENST00000384122 132 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 SNORA41-201ENST00000384675 132 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 UBA52P6-201ENST00000399822 382 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.68□□□□□ -2.14
CKS1BP61024 UBE2V1P9-201ENST00000414760 368 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 LINC01347-201ENST00000417964 355 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.68□□□□□ -2.14
CKS1BP61024 AC236972.1-201ENST00000433225 199 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 RPL35AP22-201ENST00000436855 335 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 RPS3AP12-201ENST00000443616 753 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.68□□□□□ -2.14
CKS1BP61024 RPS29P26-201ENST00000477483 171 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 AC072039.1-201ENST00000477611 581 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 KATNBL1P4-201ENST00000503545 918 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 FABP5P6-201ENST00000510588 409 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 RNU6-202P-201ENST00000515998 96 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.68□□□□□ -2.14
CKS1BP61024 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CKS1BP61024 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
CKS1BP61024 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.68□□□□□ -2.14
CKS1BP61024 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.68□□□□□ -2.14
CKS1BP61024 AC068135.2-201ENST00000569293 1028 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.68□□□□□ -2.14
CKS1BP61024 AC022662.1-201ENST00000580252 331 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.68□□□□□ -2.14
CKS1BP61024 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.68□□□□□ -2.14
CKS1BP61024 AC007229.1-201ENST00000590455 412 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 AC078899.2-201ENST00000595282 212 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 AC093732.2-201ENST00000607950 274 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.68□□□□□ -2.14
CKS1BP61024 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.68□□□□□ -2.14
CKS1BP61024 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CKS1BP61024 MTCO1P6-201ENST00000481192 1384 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 AC010329.5-201ENST00000623497 2174 ntBASIC1.68□□□□□ -2.14
CKS1BP61024 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CKS1BP61024 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.67□□□□□ -2.14
CKS1BP61024 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CKS1BP61024 AC104446.1-201ENST00000613728 1321 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CKS1BP61024 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CKS1BP61024 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CKS1BP61024 RNU6-1035P-201ENST00000384477 107 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 MIR676-201ENST00000390702 67 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.67□□□□□ -2.14
CKS1BP61024 AL592148.1-201ENST00000413568 445 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 VTA1P1-201ENST00000414044 866 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 FCF1P2-201ENST00000415284 583 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.67□□□□□ -2.14
CKS1BP61024 EIF4EP4-201ENST00000424916 578 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.67□□□□□ -2.14
CKS1BP61024 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.67□□□□□ -2.14
CKS1BP61024 HMGN1P8-201ENST00000463578 288 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 RNU6-928P-201ENST00000516876 104 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 SNORA48.10-201ENST00000516965 160 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 RNU2-19P-201ENST00000517288 84 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.67□□□□□ -2.14
CKS1BP61024 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.67□□□□□ -2.14
CKS1BP61024 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms