Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.62□□□□□ -1.99
VSX2P58304 MUPP-201ENST00000438111 566 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.62□□□□□ -1.99
VSX2P58304 PTGES3P1-201ENST00000439531 483 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AC092393.1-201ENST00000439625 742 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.62□□□□□ -1.99
VSX2P58304 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.62□□□□□ -1.99
VSX2P58304 RPL23AP20-201ENST00000447965 421 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.62□□□□□ -1.99
VSX2P58304 AC079776.3-201ENST00000450665 370 ntBASIC2.62□□□□□ -1.99
VSX2P58304 snoU109.4-201ENST00000458953 143 ntBASIC2.62□□□□□ -1.99
VSX2P58304 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.62□□□□□ -1.99
VSX2P58304 RPL9P33-201ENST00000484311 566 ntBASIC2.62□□□□□ -1.99
VSX2P58304 BOLA3P3-201ENST00000505182 232 ntBASIC2.62□□□□□ -1.99
VSX2P58304 SUMO2P5-201ENST00000506790 245 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AC105914.1-201ENST00000511798 226 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AC026412.2-201ENST00000512270 1075 ntBASIC2.62□□□□□ -1.99
VSX2P58304 SNORA31.21-201ENST00000517180 77 ntBASIC2.62□□□□□ -1.99
VSX2P58304 OR5AK1P-201ENST00000524837 922 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AC087894.1-201ENST00000538359 518 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AC018630.1-201ENST00000541376 925 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.62□□□□□ -1.99
VSX2P58304 MIR5708-201ENST00000579723 85 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AL035413.2-201ENST00000604801 525 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AP002802.2-201ENST00000605877 235 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AC004696.1-201ENST00000614345 607 ntBASIC2.62□□□□□ -1.99
VSX2P58304 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.62□□□□□ -1.99
VSX2P58304 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.62□□□□□ -1.99
VSX2P58304 U6.101-201ENST00000637707 76 ntBASIC2.62□□□□□ -1.99
VSX2P58304 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VSX2P58304 DBF4P1-201ENST00000412976 1892 ntBASIC2.62□□□□□ -1.99
VSX2P58304 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VSX2P58304 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.61□□□□□ -1.99
VSX2P58304 RNU6-236P-201ENST00000363886 106 ntBASIC2.61□□□□□ -1.99
VSX2P58304 SNORA14A-201ENST00000364773 135 ntBASIC2.61□□□□□ -1.99
VSX2P58304 SNORD51-201ENST00000384320 80 ntBASIC2.61□□□□□ -1.99
VSX2P58304 TMSB4XP8-201ENST00000402089 135 ntBASIC2.61□□□□□ -1.99
VSX2P58304 RNU4-65P-201ENST00000410473 140 ntBASIC2.61□□□□□ -1.99
VSX2P58304 RAP1BP1-201ENST00000412709 553 ntBASIC2.61□□□□□ -1.99
VSX2P58304 TMSB4XP6-201ENST00000415187 135 ntBASIC2.61□□□□□ -1.99
VSX2P58304 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.61□□□□□ -1.99
VSX2P58304 TMSB4XP1-201ENST00000424567 135 ntBASIC2.61□□□□□ -1.99
VSX2P58304 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.61□□□□□ -1.99
VSX2P58304 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.61□□□□□ -1.99
VSX2P58304 MTCYBP42-201ENST00000444653 1130 ntBASIC2.61□□□□□ -1.99
VSX2P58304 RPS23P3-201ENST00000470993 430 ntBASIC2.61□□□□□ -1.99
VSX2P58304 MLLT10P2-201ENST00000506434 249 ntBASIC2.61□□□□□ -1.99
VSX2P58304 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.61□□□□□ -1.99
VSX2P58304 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.61□□□□□ -1.99
VSX2P58304 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VSX2P58304 RNU6-1261P-201ENST00000517194 104 ntBASIC2.61□□□□□ -1.99
VSX2P58304 AC027309.2-201ENST00000520566 192 ntBASIC2.61□□□□□ -1.99
VSX2P58304 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.61□□□□□ -1.99
VSX2P58304 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.61□□□□□ -1.99
VSX2P58304 MED28P6-201ENST00000558776 231 ntBASIC2.61□□□□□ -1.99
VSX2P58304 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.61□□□□□ -1.99
VSX2P58304 HMGB1P6-201ENST00000569046 646 ntBASIC2.61□□□□□ -1.99
VSX2P58304 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.61□□□□□ -1.99
VSX2P58304 MIR4319-201ENST00000577285 85 ntBASIC2.61□□□□□ -1.99
VSX2P58304 MIR4672-201ENST00000583126 81 ntBASIC2.61□□□□□ -1.99
VSX2P58304 RPL23AP88-201ENST00000605759 454 ntBASIC2.61□□□□□ -1.99
VSX2P58304 OR2AS2P-201ENST00000606902 342 ntBASIC2.61□□□□□ -1.99
VSX2P58304 VIS1.1-201ENST00000610517 203 ntBASIC2.61□□□□□ -1.99
VSX2P58304 AC007275.1-201ENST00000621243 671 ntBASIC2.61□□□□□ -1.99
VSX2P58304 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.61□□□□□ -1.99
VSX2P58304 AP003122.6-201ENST00000623831 495 ntBASIC2.61□□□□□ -1.99
VSX2P58304 ZNF663P-202ENST00000641770 1131 ntBASIC2.61□□□□□ -1.99
VSX2P58304 AC233263.6-201ENST00000631132 1963 ntBASIC2.61□□□□□ -1.99
VSX2P58304 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
VSX2P58304 FAM35BP-202ENST00000497389 3337 ntBASIC2.6□□□□□ -1.99
VSX2P58304 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
VSX2P58304 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VSX2P58304 CD24P4-201ENST00000382840 243 ntBASIC2.6□□□□□ -1.99
VSX2P58304 RNU1-109P-201ENST00000383960 147 ntBASIC2.6□□□□□ -1.99
VSX2P58304 SNRPEP2-201ENST00000397592 279 ntBASIC2.6□□□□□ -1.99
VSX2P58304 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.6□□□□□ -1.99
VSX2P58304 CYCSP45-201ENST00000402289 315 ntBASIC2.6□□□□□ -1.99
VSX2P58304 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.6□□□□□ -1.99
VSX2P58304 RNA5SP21-201ENST00000410917 96 ntBASIC2.6□□□□□ -1.99
VSX2P58304 AC099677.1-201ENST00000420575 175 ntBASIC2.6□□□□□ -1.99
VSX2P58304 USP9YP21-201ENST00000420603 432 ntBASIC2.6□□□□□ -1.99
VSX2P58304 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.6□□□□□ -1.99
VSX2P58304 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.6□□□□□ -1.99
VSX2P58304 RPS29P6-201ENST00000438196 145 ntBASIC2.6□□□□□ -1.99
VSX2P58304 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
VSX2P58304 AC005297.2-201ENST00000450430 606 ntBASIC2.6□□□□□ -1.99
VSX2P58304 USP9YP34-201ENST00000453983 808 ntBASIC2.6□□□□□ -1.99
VSX2P58304 RPL23AP31-201ENST00000456160 467 ntBASIC2.6□□□□□ -1.99
VSX2P58304 SNORD109B-201ENST00000458961 67 ntBASIC2.6□□□□□ -1.99
VSX2P58304 SNORD109A-201ENST00000459128 67 ntBASIC2.6□□□□□ -1.99
VSX2P58304 AC010460.2-201ENST00000509054 677 ntBASIC2.6□□□□□ -1.99
VSX2P58304 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.6□□□□□ -1.99
VSX2P58304 AC093752.1-206ENST00000511823 336 ntBASIC2.6□□□□□ -1.99
VSX2P58304 AC034159.1-201ENST00000513885 583 ntBASIC2.6□□□□□ -1.99
VSX2P58304 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.6□□□□□ -1.99
VSX2P58304 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.6□□□□□ -1.99
VSX2P58304 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.6□□□□□ -1.99
VSX2P58304 MTCYBP27-201ENST00000555160 670 ntBASIC2.6□□□□□ -1.99
VSX2P58304 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.6□□□□□ -1.99
VSX2P58304 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms