Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL355472.4-201ENST00000610233 626 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN20P56880 AC009268.2-201ENST00000621925 457 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AL392088.2-201ENST00000637607 285 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN20P56880 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN20P56880 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN20P56880 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CLDN20P56880 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CLDN20P56880 RNU6-629P-201ENST00000384061 103 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 AL590704.1-201ENST00000402856 794 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 RN7SKP156-201ENST00000410308 342 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 RAD23BP2-201ENST00000416003 1207 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 SPA17P1-201ENST00000416656 452 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.45□□□□□ -1.86
CLDN20P56880 USP9YP14-201ENST00000430663 563 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AL445584.1-201ENST00000431451 330 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.45□□□□□ -1.86
CLDN20P56880 AL121871.1-201ENST00000443413 436 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AC244505.5-201ENST00000443639 207 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.45□□□□□ -1.86
CLDN20P56880 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN20P56880 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.45□□□□□ -1.86
CLDN20P56880 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 RNU7-170P-201ENST00000459303 61 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 RPL7P15-201ENST00000461190 712 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 RN7SL542P-201ENST00000467147 294 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AC078817.1-201ENST00000492623 435 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 ARL2BPP6-201ENST00000512757 439 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 AC023632.4-201ENST00000517783 191 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 AP003122.4-201ENST00000530980 758 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.45□□□□□ -1.86
CLDN20P56880 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 AL356432.3-201ENST00000568952 465 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AC012182.1-201ENST00000570133 895 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AC137800.2-201ENST00000574375 120 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 MIR3682-201ENST00000581338 84 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AC078795.2-201ENST00000602835 1252 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AC121334.2-201ENST00000605387 271 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 NDUFA8P1-201ENST00000605525 367 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AL158211.4-201ENST00000606988 584 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 RNU6-87P-201ENST00000607561 108 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN20P56880 AC091905.1-201ENST00000624400 311 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 AC244258.1-201ENST00000637553 1071 ntBASIC3.45□□□□□ -1.86
CLDN20P56880 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN20P56880 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.45□□□□□ -1.86
CLDN20P56880 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN20P56880 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
CLDN20P56880 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN20P56880 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN20P56880 AC004925.1-201ENST00000624256 2706 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN20P56880 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN20P56880 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CLDN20P56880 AP004289.2-201ENST00000444413 1457 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 RNA5SP235-201ENST00000365411 114 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 RNU6-1042P-201ENST00000384204 107 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 SNORD3H-201ENST00000384486 214 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AL391417.1-201ENST00000404100 426 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 CCNG1P1-201ENST00000406783 885 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CLDN20P56880 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 RAC1P7-201ENST00000445367 377 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN20P56880 HMGB3P8-201ENST00000449709 577 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 AC234775.1-201ENST00000454247 670 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 TPT1P7-201ENST00000458300 517 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AP000873.1-201ENST00000463987 400 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AC007537.2-201ENST00000472093 511 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 NDUFB4P2-201ENST00000509515 391 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms