Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC015871.2-201ENST00000603605 948 ntBASIC3.26□□□□□ -1.89
PEX3P56589 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.26□□□□□ -1.89
PEX3P56589 AC017037.3-201ENST00000625016 472 ntBASIC3.26□□□□□ -1.89
PEX3P56589 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.26□□□□□ -1.89
PEX3P56589 AC005539.1-201ENST00000443768 1479 ntBASIC3.26□□□□□ -1.89
PEX3P56589 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.26□□□□□ -1.89
PEX3P56589 DDX43P2-201ENST00000604753 1354 ntBASIC3.25□□□□□ -1.89
PEX3P56589 AL079343.1-201ENST00000572358 1771 ntBASIC3.25□□□□□ -1.89
PEX3P56589 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.25□□□□□ -1.89
PEX3P56589 ZNF807-201ENST00000328088 1707 ntBASIC3.25□□□□□ -1.89
PEX3P56589 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PEX3P56589 RNU6-343P-201ENST00000364709 104 ntBASIC3.25□□□□□ -1.89
PEX3P56589 Z92545.1-201ENST00000411782 234 ntBASIC3.25□□□□□ -1.89
PEX3P56589 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX3P56589 NDUFB4P5-201ENST00000415445 361 ntBASIC3.25□□□□□ -1.89
PEX3P56589 AC244098.2-201ENST00000422068 99 ntBASIC3.25□□□□□ -1.89
PEX3P56589 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.25□□□□□ -1.89
PEX3P56589 AC010099.3-201ENST00000423896 409 ntBASIC3.25□□□□□ -1.89
PEX3P56589 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.25□□□□□ -1.89
PEX3P56589 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX3P56589 YWHAZP7-201ENST00000436906 631 ntBASIC3.25□□□□□ -1.89
PEX3P56589 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.25□□□□□ -1.89
PEX3P56589 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.25□□□□□ -1.89
PEX3P56589 MTCO3P11-201ENST00000455103 774 ntBASIC3.25□□□□□ -1.89
PEX3P56589 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.25□□□□□ -1.89
PEX3P56589 AC097493.1-201ENST00000463958 372 ntBASIC3.25□□□□□ -1.89
PEX3P56589 RPS29P26-201ENST00000477483 171 ntBASIC3.25□□□□□ -1.89
PEX3P56589 AC090453.1-201ENST00000495560 436 ntBASIC3.25□□□□□ -1.89
PEX3P56589 AC080014.1-201ENST00000496877 1201 ntBASIC3.25□□□□□ -1.89
PEX3P56589 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PEX3P56589 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX3P56589 XKRY-201ENST00000510392 1100 ntBASIC3.25□□□□□ -1.89
PEX3P56589 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX3P56589 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.25□□□□□ -1.89
PEX3P56589 RNU6-1129P-201ENST00000515964 104 ntBASIC3.25□□□□□ -1.89
PEX3P56589 MTATP6P15-201ENST00000527233 835 ntBASIC3.25□□□□□ -1.89
PEX3P56589 DUXAP5-201ENST00000529668 529 ntBASIC3.25□□□□□ -1.89
PEX3P56589 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.25□□□□□ -1.89
PEX3P56589 OR6C73P-201ENST00000546432 358 ntBASIC3.25□□□□□ -1.89
PEX3P56589 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX3P56589 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
PEX3P56589 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX3P56589 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.25□□□□□ -1.89
PEX3P56589 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.25□□□□□ -1.89
PEX3P56589 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.25□□□□□ -1.89
PEX3P56589 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.25□□□□□ -1.89
PEX3P56589 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PEX3P56589 AP000526.1-201ENST00000603308 1388 ntBASIC3.25□□□□□ -1.89
PEX3P56589 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PEX3P56589 AL355596.1-201ENST00000565399 3996 ntBASIC3.24□□□□□ -1.89
PEX3P56589 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
PEX3P56589 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PEX3P56589 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PEX3P56589 RNU6-263P-201ENST00000363811 107 ntBASIC3.24□□□□□ -1.89
PEX3P56589 MT-TC-201ENST00000387405 66 ntBASIC3.24□□□□□ -1.89
PEX3P56589 TAS2R15P-201ENST00000390674 928 ntBASIC3.24□□□□□ -1.89
PEX3P56589 EEF1A1P41-201ENST00000414667 207 ntBASIC3.24□□□□□ -1.89
PEX3P56589 OR2AS1P-201ENST00000427827 319 ntBASIC3.24□□□□□ -1.89
PEX3P56589 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.24□□□□□ -1.89
PEX3P56589 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.24□□□□□ -1.89
PEX3P56589 RPL7P34-201ENST00000433316 712 ntBASIC3.24□□□□□ -1.89
PEX3P56589 RPL23AP74-201ENST00000437246 471 ntBASIC3.24□□□□□ -1.89
PEX3P56589 AL008629.1-201ENST00000438615 184 ntBASIC3.24□□□□□ -1.89
PEX3P56589 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.24□□□□□ -1.89
PEX3P56589 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.24□□□□□ -1.89
PEX3P56589 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.24□□□□□ -1.89
PEX3P56589 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.24□□□□□ -1.89
PEX3P56589 MTND2P19-201ENST00000449129 1012 ntBASIC3.24□□□□□ -1.89
PEX3P56589 AL162389.1-201ENST00000449233 177 ntBASIC3.24□□□□□ -1.89
PEX3P56589 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.24□□□□□ -1.89
PEX3P56589 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.24□□□□□ -1.89
PEX3P56589 RNU7-136P-201ENST00000458819 69 ntBASIC3.24□□□□□ -1.89
PEX3P56589 MTCO2P6-201ENST00000463134 685 ntBASIC3.24□□□□□ -1.89
PEX3P56589 SYPL1P1-201ENST00000473622 768 ntBASIC3.24□□□□□ -1.89
PEX3P56589 SCGB1D5P-201ENST00000515134 247 ntBASIC3.24□□□□□ -1.89
PEX3P56589 AC026407.1-201ENST00000518369 204 ntBASIC3.24□□□□□ -1.89
PEX3P56589 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.24□□□□□ -1.89
PEX3P56589 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.24□□□□□ -1.89
PEX3P56589 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.24□□□□□ -1.89
PEX3P56589 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.24□□□□□ -1.89
PEX3P56589 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.24□□□□□ -1.89
PEX3P56589 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PEX3P56589 AC090616.5-202ENST00000582111 297 ntBASIC3.24□□□□□ -1.89
PEX3P56589 MAGOH2P-202ENST00000584384 429 ntBASIC3.24□□□□□ -1.89
PEX3P56589 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.24□□□□□ -1.89
PEX3P56589 VN1R90P-201ENST00000595717 726 ntBASIC3.24□□□□□ -1.89
PEX3P56589 DPRXP5-201ENST00000604662 539 ntBASIC3.24□□□□□ -1.89
PEX3P56589 AL133507.1-201ENST00000605269 557 ntBASIC3.24□□□□□ -1.89
PEX3P56589 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.24□□□□□ -1.89
PEX3P56589 AC104454.1-201ENST00000421341 1401 ntBASIC3.24□□□□□ -1.89
PEX3P56589 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.24□□□□□ -1.89
PEX3P56589 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PEX3P56589 FAM35CP-201ENST00000554755 2470 ntBASIC3.24□□□□□ -1.89
PEX3P56589 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.23□□□□□ -1.89
PEX3P56589 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PEX3P56589 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PEX3P56589 RNU6-821P-201ENST00000390995 107 ntBASIC3.23□□□□□ -1.89
PEX3P56589 RPL21P3-201ENST00000395517 478 ntBASIC3.23□□□□□ -1.89
PEX3P56589 UBA52P6-201ENST00000399822 382 ntBASIC3.23□□□□□ -1.89
PEX3P56589 U3.42-201ENST00000408746 214 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms