Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CDH13P55290 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH13P55290 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH13P55290 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH13P55290 AC093010.3-201ENST00000570269 15214 ntBASIC3.41□□□□□ -1.86
CDH13P55290 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH13P55290 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CDH13P55290 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH13P55290 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH13P55290 RNU6-223P-201ENST00000362830 107 ntBASIC3.41□□□□□ -1.86
CDH13P55290 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH13P55290 RNU6-55P-201ENST00000411092 107 ntBASIC3.41□□□□□ -1.86
CDH13P55290 RNU6-954P-201ENST00000411355 107 ntBASIC3.41□□□□□ -1.86
CDH13P55290 RNU6-516P-201ENST00000411381 104 ntBASIC3.41□□□□□ -1.86
CDH13P55290 AC109780.2-201ENST00000413467 845 ntBASIC3.41□□□□□ -1.86
CDH13P55290 PPP1R11P2-201ENST00000423543 382 ntBASIC3.41□□□□□ -1.86
CDH13P55290 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH13P55290 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH13P55290 AC233728.2-201ENST00000425348 757 ntBASIC3.41□□□□□ -1.86
CDH13P55290 MED14P1-201ENST00000430517 648 ntBASIC3.41□□□□□ -1.86
CDH13P55290 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH13P55290 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH13P55290 RPL26P6-201ENST00000440913 438 ntBASIC3.41□□□□□ -1.86
CDH13P55290 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH13P55290 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH13P55290 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH13P55290 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH13P55290 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH13P55290 CFTRP1-201ENST00000456646 183 ntBASIC3.41□□□□□ -1.86
CDH13P55290 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH13P55290 AC010401.1-201ENST00000463867 348 ntBASIC3.41□□□□□ -1.86
CDH13P55290 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH13P55290 BET1P1-201ENST00000482276 359 ntBASIC3.41□□□□□ -1.86
CDH13P55290 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH13P55290 AC114967.1-201ENST00000504890 259 ntBASIC3.41□□□□□ -1.86
CDH13P55290 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH13P55290 AC110768.1-201ENST00000509222 400 ntBASIC3.41□□□□□ -1.86
CDH13P55290 MIR2276-201ENST00000516886 89 ntBASIC3.41□□□□□ -1.86
CDH13P55290 RNU6-1003P-201ENST00000517099 105 ntBASIC3.41□□□□□ -1.86
CDH13P55290 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH13P55290 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH13P55290 MIR3915-201ENST00000578518 97 ntBASIC3.41□□□□□ -1.86
CDH13P55290 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH13P55290 TPMTP1-201ENST00000592307 737 ntBASIC3.41□□□□□ -1.86
CDH13P55290 AL109653.1-201ENST00000603091 248 ntBASIC3.41□□□□□ -1.86
CDH13P55290 AC092354.1-201ENST00000606057 376 ntBASIC3.41□□□□□ -1.86
CDH13P55290 AP002826.1-201ENST00000608835 315 ntBASIC3.41□□□□□ -1.86
CDH13P55290 AL159972.1-201ENST00000625150 448 ntBASIC3.41□□□□□ -1.86
CDH13P55290 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.41□□□□□ -1.86
CDH13P55290 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH13P55290 AC092326.2-201ENST00000624772 1561 ntBASIC3.41□□□□□ -1.86
CDH13P55290 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH13P55290 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH13P55290 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CDH13P55290 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CDH13P55290 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CDH13P55290 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH13P55290 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.4□□□□□ -1.86
CDH13P55290 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.86
CDH13P55290 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH13P55290 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH13P55290 RNU5E-8P-201ENST00000363502 116 ntBASIC3.4□□□□□ -1.87
CDH13P55290 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH13P55290 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CDH13P55290 AP000567.1-201ENST00000406413 156 ntBASIC3.4□□□□□ -1.87
CDH13P55290 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH13P55290 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH13P55290 RPL17P36-201ENST00000420302 549 ntBASIC3.4□□□□□ -1.87
CDH13P55290 AL035423.1-201ENST00000420331 213 ntBASIC3.4□□□□□ -1.87
CDH13P55290 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH13P55290 AL390023.1-201ENST00000428836 262 ntBASIC3.4□□□□□ -1.87
CDH13P55290 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH13P55290 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH13P55290 MTND1P30-201ENST00000441241 901 ntBASIC3.4□□□□□ -1.87
CDH13P55290 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH13P55290 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH13P55290 ZNF114P1-201ENST00000453500 292 ntBASIC3.4□□□□□ -1.87
CDH13P55290 AC023598.1-201ENST00000472521 361 ntBASIC3.4□□□□□ -1.87
CDH13P55290 RPL23AP41-201ENST00000484754 458 ntBASIC3.4□□□□□ -1.87
CDH13P55290 AC109486.1-201ENST00000486833 374 ntBASIC3.4□□□□□ -1.87
CDH13P55290 AC118465.1-201ENST00000513820 1271 ntBASIC3.4□□□□□ -1.87
CDH13P55290 RN7SKP13-201ENST00000515933 244 ntBASIC3.4□□□□□ -1.87
CDH13P55290 SNORA70.19-201ENST00000516717 90 ntBASIC3.4□□□□□ -1.87
CDH13P55290 SNORA31.22-201ENST00000517204 135 ntBASIC3.4□□□□□ -1.87
CDH13P55290 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH13P55290 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH13P55290 AC125611.2-201ENST00000551907 647 ntBASIC3.4□□□□□ -1.87
CDH13P55290 GTF2IP22-201ENST00000554443 182 ntBASIC3.4□□□□□ -1.87
CDH13P55290 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH13P55290 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH13P55290 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH13P55290 AP005205.1-201ENST00000563503 508 ntBASIC3.4□□□□□ -1.87
CDH13P55290 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH13P55290 AC105224.1-201ENST00000587055 421 ntBASIC3.4□□□□□ -1.87
CDH13P55290 AC067852.3-201ENST00000589177 561 ntBASIC3.4□□□□□ -1.87
CDH13P55290 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH13P55290 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH13P55290 U6.98-201ENST00000637157 84 ntBASIC3.4□□□□□ -1.87
CDH13P55290 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH13P55290 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms